Literature DB >> 9753697

CAMPASS: a database of structurally aligned protein superfamilies.

R Sowdhamini1, D F Burke, J F Huang, K Mizuguchi, H A Nagarajaram, N Srinivasan, R E Steward, T L Blundell.   

Abstract

Mesh：

Year:  1998        PMID： 9753697     DOI： 10.1016/s0969-2126(98)00110-5

Source DB:  PubMed          Journal:  Structure        ISSN： 0969-2126            Impact factor:   5.006


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  17 in total

Review 1.  Microbial relatives of the seed storage proteins of higher plants: conservation of structure and diversification of function during evolution of the cupin superfamily.

Authors:  J M Dunwell; S Khuri; P J Gane
Journal:  Microbiol Mol Biol Rev       Date:  2000-03       Impact factor: 11.056

2.  Improvement of comparative modeling by the application of conserved motifs amongst distantly related proteins as additional restraints.

Authors:  Saikat Chakrabarti; Jaisurya John; Ramanathan Sowdhamini
Journal:  J Mol Model       Date:  2003-12-23       Impact factor: 1.810

3.  HOMSTRAD: recent developments of the Homologous Protein Structure Alignment Database.

Authors:  Lucy A Stebbings; Kenji Mizuguchi
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

4.  Definition of the tempo of sequence diversity across an alignment and automatic identification of sequence motifs: Application to protein homologous families and superfamilies.

Authors:  Alex C W May
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

5.  CE-MC: a multiple protein structure alignment server.

Authors:  Chittibabu Guda; Sifang Lu; Eric D Scheeff; Philip E Bourne; Ilya N Shindyalov
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

6.  iMOT: an interactive package for the selection of spatially interacting motifs.

Authors:  A Bhaduri; G Pugalenthi; N Gupta; R Sowdhamini
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

7.  Structural similarity to bridge sequence space: finding new families on the bridges.

Authors:  Parantu K Shah; Patrick Aloy; Peer Bork; Robert B Russell
Journal:  Protein Sci       Date:  2005-05       Impact factor: 6.725

8.  Evolutionary conservation of protein backbone flexibility.

Authors:  Sandra Maguid; Sebastián Fernández-Alberti; Gustavo Parisi; Julián Echave
Journal:  J Mol Evol       Date:  2006-10-04       Impact factor: 2.395

9.  Comparison of sequence-based and structure-based phylogenetic trees of homologous proteins: Inferences on protein evolution.

Authors:  S Balaji; N Srinivasan
Journal:  J Biosci       Date:  2007-01       Impact factor: 1.826

10.  PASS2: a semi-automated database of protein alignments organised as structural superfamilies.

Authors:  V Mallika; Anirban Bhaduri; R Sowdhamini
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971
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