Literature DB >> 9736774

Characterization of genes encoding translation initiation factor eIF-2gamma in mouse and human: sex chromosome localization, escape from X-inactivation and evolution.

I E Ehrmann1, P S Ellis, S Mazeyrat, S Duthie, N Brockdorff, M G Mattei, M A Gavin, N A Affara, G M Brown, E Simpson, M J Mitchell, D M Scott.   

Abstract

The Delta Sxrb interval of the mouse Y chromosome is critical for spermatogenesis and expression of the male-specific minor transplantation antigen H-Y. Several genes have been mapped to this interval and each has a homologue on the X chromosome. Four, Zfy1 , Zfy2 , Ube1y and Dffry , are expressed specifically in the testis and their X homologues are not transcribed from the inactive X chromosome. A further two, Smcy and Uty , are ubiquitously expressed and their X homologues escape X-inactivation. Here we report the identification of another gene from this region of the mouse Y chromosome. It encodes the highly conserved eukaryotic translation initiation factor eIF-2gamma. In the mouse this gene is ubiquitously expressed, has an X chromosome homologue which maps close to Dmd and escapes X-inactivation. The coding regions of the X and Y genes show 86% nucleotide identity and encode putative products with 98% amino acid identity. In humans, the eIF-2gamma structural gene is located on the X chromosome at Xp21 and this also escapes X-inactivation. However, there is no evidence of a Y copy of this gene in humans. We have identified autosomal retroposons of eIF-2gamma in both humans and mice and an additional retroposon on the X chromosome in some mouse strains. Ark blot analysis of eutherian and metatherian genomic DNA indicates that X-Y homologues are present in all species tested except simian primates and kangaroo and that retroposons are common to a wide range of mammals. These results shed light on the evolution of X-Y homologous genes.

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Year:  1998        PMID: 9736774     DOI: 10.1093/hmg/7.11.1725

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  38 in total

1.  Extensive conservation of sex chromosome organization between cat and human revealed by parallel radiation hybrid mapping.

Authors:  W J Murphy; S Sun; Z Q Chen; J Pecon-Slattery; S J O'Brien
Journal:  Genome Res       Date:  1999-12       Impact factor: 9.043

Review 2.  The role of human and mouse Y chromosome genes in male infertility.

Authors:  N A Affara; M J Mitchell
Journal:  J Endocrinol Invest       Date:  2000-11       Impact factor: 4.256

3.  macroH2A1 histone variants are depleted on active genes but concentrated on the inactive X chromosome.

Authors:  Lakshmi N Changolkar; John R Pehrson
Journal:  Mol Cell Biol       Date:  2006-06       Impact factor: 4.272

4.  Clustered transcripts that escape X inactivation at mouse XqD.

Authors:  Alexandra M Lopes; Sarah E Arnold-Croop; António Amorim; Laura Carrel
Journal:  Mamm Genome       Date:  2011-07-19       Impact factor: 2.957

5.  X and Y chromosome complement influence adiposity and metabolism in mice.

Authors:  Xuqi Chen; Rebecca McClusky; Yuichiro Itoh; Karen Reue; Arthur P Arnold
Journal:  Endocrinology       Date:  2013-02-08       Impact factor: 4.736

6.  Origins and functional evolution of Y chromosomes across mammals.

Authors:  Diego Cortez; Ray Marin; Deborah Toledo-Flores; Laure Froidevaux; Angélica Liechti; Paul D Waters; Frank Grützner; Henrik Kaessmann
Journal:  Nature       Date:  2014-04-24       Impact factor: 49.962

7.  The critical region of overlap defining the AZFa male infertility interval of proximal Yq contains three transcribed sequences.

Authors:  C A Sargent; C A Boucher; S Kirsch; G Brown; B Weiss; A Trundley; P Burgoyne; N Saut; C Durand; N Levy; P Terriou; T Hargreave; H Cooke; M Mitchell; G A Rappold; N A Affara
Journal:  J Med Genet       Date:  1999-09       Impact factor: 6.318

8.  Global survey of escape from X inactivation by RNA-sequencing in mouse.

Authors:  Fan Yang; Tomas Babak; Jay Shendure; Christine M Disteche
Journal:  Genome Res       Date:  2010-04-02       Impact factor: 9.043

9.  Inactive X chromosome-specific histone H3 modifications and CpG hypomethylation flank a chromatin boundary between an X-inactivated and an escape gene.

Authors:  Yuji Goto; Hiroshi Kimura
Journal:  Nucleic Acids Res       Date:  2009-12       Impact factor: 16.971

10.  Transcriptional changes in response to X chromosome dosage in the mouse: implications for X inactivation and the molecular basis of Turner Syndrome.

Authors:  Alexandra M Lopes; Paul S Burgoyne; Andrew Ojarikre; Julien Bauer; Carole A Sargent; António Amorim; Nabeel A Affara
Journal:  BMC Genomics       Date:  2010-02-01       Impact factor: 3.969

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