Literature DB >> 9734811

Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.

K Ishikawa1, T Nagase, M Suyama, N Miyajima, A Tanaka, H Kotani, N Nomura, O Ohara.   

Abstract

As an extension of our cDNA analysis for deducing the coding sequences of unidentified human genes, we have newly determined the sequences of 100 cDNA clones from a set of size-fractionated human brain cDNA libraries, and predicted the coding sequences of the corresponding genes, named KIAA0611 to KIAA0710. In vitro transcription-coupled translation assay was applied as the first screening to select cDNA clones which produce proteins with apparent molecular mass of 50 kDa and over. One hundred unidentified cDNA clones thus selected were then subjected to sequencing of entire inserts. The average size of the inserts and corresponding open reading frames was 4.9 kb and 2.8 kb (922 amino acid residues), respectively. Computer search of the sequences against the public databases indicated that predicted coding sequences of 87 genes were similar to those of known genes, 62% of which (54 genes) were categorized as proteins related to cell signaling/communication, cell structure/motility and nucleic acid management. The expression profiles in 10 human tissues of all the clones characterized in this study were examined by reverse transcription-coupled polymerase chain reaction and the chromosomal locations of the clones were determined by using human-rodent hybrid panels.

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Year:  1998        PMID: 9734811     DOI: 10.1093/dnares/5.3.169

Source DB:  PubMed          Journal:  DNA Res        ISSN: 1340-2838            Impact factor:   4.458


  32 in total

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3.  Mast, a conserved microtubule-associated protein required for bipolar mitotic spindle organization.

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4.  The human aminophospholipid-transporting ATPase gene ATP10C maps adjacent to UBE3A and exhibits similar imprinted expression.

Authors:  L B Herzing; S J Kim; E H Cook ; D H Ledbetter
Journal:  Am J Hum Genet       Date:  2001-05-11       Impact factor: 11.025

5.  Rapid deadenylation triggered by a nonsense codon precedes decay of the RNA body in a mammalian cytoplasmic nonsense-mediated decay pathway.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Mol Cell Biol       Date:  2003-07       Impact factor: 4.272

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7.  A two-hybrid system for transactivator bait proteins.

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9.  BFIT, a unique acyl-CoA thioesterase induced in thermogenic brown adipose tissue: cloning, organization of the human gene and assessment of a potential link to obesity.

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10.  Obscurin-like 1, OBSL1, is a novel cytoskeletal protein related to obscurin.

Authors:  Sarah B Geisler; Dustin Robinson; Maria Hauringa; Maide O Raeker; Andrei B Borisov; Margaret V Westfall; Mark W Russell
Journal:  Genomics       Date:  2007-02-06       Impact factor: 5.736

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