Literature DB >> 9716468

Analysis of the REDOR signal and inversion

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Abstract

An inversion of the REDOR signal to recover the dipolar couplings has been recently proposed [K. T. Mueller et al., Chem. Phys. Lett. 242, 535 (1995)]: The corresponding integral transform was performed by tabulation of the kernel followed by numerical integration. After explicit determination of the inverse REDOR kernel by the Mellin transform method, we propose an alternative inversion method based on Fourier transforms. Representation of the inverse REDOR kernel by its asymptotic expansion reveals that the inverse REDOR operator is essentially a weighted sum of a cosine transform and of its derivative. Consequently, known properties of Fourier transforms can easily be transposed to the REDOR inversion, allowing for a precise discussion of the value of the method. Moreover, the first term of the asymptotic expansion leading to a derivative of a cosine transform, the REDOR inversion is found to be extremely sensitive to noise, thus considerably reducing the useful part of the theoretical dipolar window. Copyright 1998 Academic Press.

Year:  1998        PMID: 9716468     DOI: 10.1006/jmre.1998.1462

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  10 in total

1.  The Carboxyl Terminus of Eremomycin Facilitates Binding to the Non-d-Ala-d-Ala Segment of the Peptidoglycan Pentapeptide Stem.

Authors:  James Chang; Hongyu Zhou; Maria Preobrazhenskaya; Peng Tao; Sung Joon Kim
Journal:  Biochemistry       Date:  2016-06-07       Impact factor: 3.162

2.  Structures of Staphylococcus aureus cell-wall complexes with vancomycin, eremomycin, and chloroeremomycin derivatives by 13C{19F} and 15N{19F} rotational-echo double resonance.

Authors:  Sung Joon Kim; Lynette Cegelski; Maria Preobrazhenskaya; Jacob Schaefer
Journal:  Biochemistry       Date:  2006-04-25       Impact factor: 3.162

3.  Staphylococcus aureus peptidoglycan stem packing by rotational-echo double resonance NMR spectroscopy.

Authors:  Sung Joon Kim; Manmilan Singh; Maria Preobrazhenskaya; Jacob Schaefer
Journal:  Biochemistry       Date:  2013-05-14       Impact factor: 3.162

4.  REDOR constraints on the peptidoglycan lattice architecture of Staphylococcus aureus and its FemA mutant.

Authors:  Manmilan Singh; Sung Joon Kim; Shasad Sharif; Maria Preobrazhenskaya; Jacob Schaefer
Journal:  Biochim Biophys Acta       Date:  2014-06-02

5.  Oritavancin binds to isolated protoplast membranes but not intact protoplasts of Staphylococcus aureus.

Authors:  Sung Joon Kim; Manmilan Singh; Jacob Schaefer
Journal:  J Mol Biol       Date:  2009-06-16       Impact factor: 5.469

6.  Locations of the hydrophobic side chains of lipoglycopeptides bound to the peptidoglycan of Staphylococcus aureus.

Authors:  Sung Joon Kim; Kelly S E Tanaka; Evelyne Dietrich; Adel Rafai Far; Jacob Schaefer
Journal:  Biochemistry       Date:  2013-05-08       Impact factor: 3.162

7.  Vancomycin derivative with damaged D-Ala-D-Ala binding cleft binds to cross-linked peptidoglycan in the cell wall of Staphylococcus aureus.

Authors:  Sung Joon Kim; Shigeru Matsuoka; Gary J Patti; Jacob Schaefer
Journal:  Biochemistry       Date:  2008-02-27       Impact factor: 3.162

8.  Hydrophobic side-chain length determines activity and conformational heterogeneity of a vancomycin derivative bound to the cell wall of Staphylococcus aureus.

Authors:  Sung Joon Kim; Jacob Schaefer
Journal:  Biochemistry       Date:  2008-08-30       Impact factor: 3.162

9.  Solid-state NMR characterization of amphomycin effects on peptidoglycan and wall teichoic acid biosyntheses in Staphylococcus aureus.

Authors:  Manmilan Singh; James Chang; Lauryn Coffman; Sung Joon Kim
Journal:  Sci Rep       Date:  2016-08-19       Impact factor: 4.379

10.  Cross-link formation and peptidoglycan lattice assembly in the FemA mutant of Staphylococcus aureus.

Authors:  Sung Joon Kim; Manmilan Singh; Shasad Sharif; Jacob Schaefer
Journal:  Biochemistry       Date:  2014-02-26       Impact factor: 3.162

  10 in total

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