Literature DB >> 9704028

Ion pairs involved in maintaining a thermostable structure of glutamate dehydrogenase from a hyperthermophilic archaeon.

R N Rahman1, S Fujiwara, H Nakamura, M Takagi, T Imanaka.   

Abstract

Intersubunit ion pairs are considered to be involved for maintaining a stable structure of the glutamate dehydrogenase (GDH) from hyperthermophiles. In order to demonstrate an effect of intersubunit ion pairs on the structural stability, two kinds of mutation (T138E, Thr at position 138 was replaced by Glu; E158Q, Glu at position 158 was replaced by Gln) which add and remove ion pairs, respectively, were introduced into Pk-gdhA gene encoding GDH from Pyrococcus kodakaraensis KOD1. Addition of one ion pair (Pk-GDHA-T138E) increased the optimum temperature and thermostability. In contrast, Pk-GDH-E158Q showed lower optimum temperature and less thermostability than wild type GDH. Structure analysis of GDHs was performed by circular dichroism (CD) and indicated that all recombinant enzymes (Pk-GDH, Pk-GDH-T138E, Pk-GDH-E158Q) possess different structures from that of natural GDH. Upon heat treatment (60 degrees C, 2 h), the structures of Pk-GDH and Pk-GDH-T138E were converted to another form close to the natural structure. However, no structural conversion by heat treatment was observed in Pk-GDH-E158Q. These results indicate that intersubunit ion pairs play an important role in forming thermostable structure of Pk-GDH.

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Year:  1998        PMID: 9704028     DOI: 10.1006/bbrc.1998.8933

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  12 in total

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Authors:  C Vieille; G J Zeikus
Journal:  Microbiol Mol Biol Rev       Date:  2001-03       Impact factor: 11.056

2.  Genetic examination of initial amino acid oxidation and glutamate catabolism in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Yuusuke Yokooji; Takaaki Sato; Shinsuke Fujiwara; Tadayuki Imanaka; Haruyuki Atomi
Journal:  J Bacteriol       Date:  2013-02-22       Impact factor: 3.490

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Authors:  Jing Zeng; Xiaowei Gao; Zheng Dai; Bing Tang; Xiao-Feng Tang
Journal:  Appl Environ Microbiol       Date:  2014-02-21       Impact factor: 4.792

4.  Four Inserts within the Catalytic Domain Confer Extra Stability and Activity to Hyperthermostable Pyrolysin from Pyrococcus furiosus.

Authors:  Xiaowei Gao; Jing Zeng; Huawei Yi; Fang Zhang; Bing Tang; Xiao-Feng Tang
Journal:  Appl Environ Microbiol       Date:  2017-02-15       Impact factor: 4.792

5.  Structural and functional features of an NDP kinase from the hyperthermophile crenarchaeon Pyrobaculum aerophilum.

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6.  Two biosynthetic pathways for aromatic amino acids in the archaeon Methanococcus maripaludis.

Authors:  Iris Porat; Brian W Waters; Quincy Teng; William B Whitman
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

7.  Characterization of a thermostable cyclodextrin glucanotransferase from Pyrococcus furiosus DSM3638.

Authors:  Myoung-Hee Lee; Sung-Jae Yang; Jung-Woo Kim; Hee-Seob Lee; Jung-Wan Kim; Kwan-Hwa Park
Journal:  Extremophiles       Date:  2007-02-17       Impact factor: 3.035

8.  Improvement of thermal stability via outer-loop ion pair interaction of mutated T1 lipase from Geobacillus zalihae strain T1.

Authors:  Rudzanna Ruslan; Raja Noor Zaliha Raja Abd Rahman; Thean Chor Leow; Mohd Shukuri Mohamad Ali; Mahiran Basri; Abu Bakar Salleh
Journal:  Int J Mol Sci       Date:  2012-01-17       Impact factor: 6.208

9.  The role of electrostatic interactions on klentaq1 insight for domain separation.

Authors:  Santi Nurbaiti; Muhamad A Martoprawiro; Rukman Hertadi
Journal:  Bioinform Biol Insights       Date:  2012-10-30

10.  Without salt, the 'thermophilic' protein Mth10b is just mesophilic.

Authors:  Nan Zhang; Xian-Ming Pan; Meng Ge
Journal:  PLoS One       Date:  2012-12-27       Impact factor: 3.240

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