Literature DB >> 9701588

Expressed sequence tags from a root-hair-enriched medicago truncatula cDNA library

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Abstract

The root hair is a specialized cell type involved in water and nutrient uptake in plants. In legumes the root hair is also the primary site of recognition and infection by symbiotic nitrogen-fixing Rhizobium bacteria. We have studied the root hairs of Medicago truncatula, which is emerging as an increasingly important model legume for studies of symbiotic nodulation. However, only 27 genes from M. truncatula were represented in GenBank/EMBL as of October, 1997. We report here the construction of a root-hair-enriched cDNA library and single-pass sequencing of randomly selected clones. Expressed sequence tags (899 total, 603 of which have homology to known genes) were generated and made available on the Internet. We believe that the database and the associated DNA materials will provide a useful resource to the community of scientists studying the biology of roots, root tips, root hairs, and nodulation.

Entities:  

Year:  1998        PMID: 9701588      PMCID: PMC34896          DOI: 10.1104/pp.117.4.1325

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  30 in total

1.  Large scale cDNA sequencing for analysis of quantitative and qualitative aspects of gene expression.

Authors:  K Okubo; N Hori; R Matoba; T Niiyama; A Fukushima; Y Kojima; K Matsubara
Journal:  Nat Genet       Date:  1992-11       Impact factor: 38.330

2.  Modulation of development, growth dynamics, wall crystallinity, and infection sites in white clover root hairs by membrane chitolipooligosaccharides from Rhizobium leguminosarum biovar trifolii.

Authors:  F B Dazzo; G G Orgambide; S Philip-Hollingsworth; R I Hollingsworth; K O Ninke; J L Salzwedel
Journal:  J Bacteriol       Date:  1996-06       Impact factor: 3.490

3.  Cloning and characterization of two vertebrate homologs of the Drosophila eyes absent gene.

Authors:  J E Zimmerman; Q T Bui; E Steingrímsson; D L Nagle; W Fu; A Genin; N B Spinner; N G Copeland; N A Jenkins; M Bucan; N M Bonini
Journal:  Genome Res       Date:  1997-02       Impact factor: 9.043

4.  Hormones act downstream of TTG and GL2 to promote root hair outgrowth during epidermis development in the Arabidopsis root.

Authors:  J D Masucci; J W Schiefelbein
Journal:  Plant Cell       Date:  1996-09       Impact factor: 11.277

5.  Plant hormones and nodulation: what's the connection?

Authors:  A M Hirsch; Y Fang
Journal:  Plant Mol Biol       Date:  1994-10       Impact factor: 4.076

6.  Gene structure and differential regulation of the Rhizobium-induced peroxidase gene rip1.

Authors:  H M Peng; D A Dreyer; K A VandenBosch; D Cook
Journal:  Plant Physiol       Date:  1996-12       Impact factor: 8.340

7.  Cell proliferation and hair tip growth in the Arabidopsis root are under mechanistically different forms of redox control.

Authors:  R Sánchez-Fernández; M Fricker; L B Corben; N S White; N Sheard; C J Leaver; D Inzé; M J May
Journal:  Proc Natl Acad Sci U S A       Date:  1997-03-18       Impact factor: 11.205

8.  Calcium spiking in plant root hairs responding to Rhizobium nodulation signals.

Authors:  D W Ehrhardt; R Wais; S R Long
Journal:  Cell       Date:  1996-05-31       Impact factor: 41.582

9.  A sugar transporter from Medicago truncatula: altered expression pattern in roots during vesicular-arbuscular (VA) mycorrhizal associations.

Authors:  M J Harrison
Journal:  Plant J       Date:  1996-04       Impact factor: 6.417

10.  Ethylene provides positional information on cortical cell division but is not involved in Nod factor-induced root hair tip growth in Rhizobium-legume interaction.

Authors:  R Heidstra; W C Yang; Y Yalcin; S Peck; A M Emons; A van Kammen; T Bisseling
Journal:  Development       Date:  1997-05       Impact factor: 6.868

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  34 in total

Review 1.  Cell cycle regulation in the course of nodule organogenesis in Medicago.

Authors:  F Foucher; E Kondorosi
Journal:  Plant Mol Biol       Date:  2000-08       Impact factor: 4.076

2.  A critical evaluation of differential display as a tool to identify genes involved in legume nodulation: looking back and looking forward.

Authors:  S Lievens; S Goormachtig; M Holsters
Journal:  Nucleic Acids Res       Date:  2001-09-01       Impact factor: 16.971

3.  Identification and characterization of nodulation-signaling pathway 2, a gene of Medicago truncatula involved in Nod actor signaling.

Authors:  Giles E D Oldroyd; Sharon R Long
Journal:  Plant Physiol       Date:  2003-03       Impact factor: 8.340

4.  Temporal progression of gene expression responses to salt shock in maize roots.

Authors:  Hong Wang; Saori Miyazaki; Kiyoshi Kawai; Michael Deyholos; David W Galbraith; Hans J Bohnert
Journal:  Plant Mol Biol       Date:  2003-07       Impact factor: 4.076

5.  The MsPRP2 promoter enables strong heterologous gene expression in a root-specific manner and is enhanced by overexpression of Alfin 1.

Authors:  Ilga Winicov; Babu Valliyodan; Lingru Xue; J Kenneth Hoober
Journal:  Planta       Date:  2004-06-04       Impact factor: 4.116

6.  Molecular and biochemical characterization of 2-hydroxyisoflavanone dehydratase. Involvement of carboxylesterase-like proteins in leguminous isoflavone biosynthesis.

Authors:  Tomoyoshi Akashi; Toshio Aoki; Shin-Ichi Ayabe
Journal:  Plant Physiol       Date:  2005-02-25       Impact factor: 8.340

7.  Mapping the proteome of barrel medic (Medicago truncatula).

Authors:  Bonnie S Watson; Victor S Asirvatham; Liangjiang Wang; Lloyd W Sumner
Journal:  Plant Physiol       Date:  2003-03       Impact factor: 8.340

8.  Microsynteny between pea and Medicago truncatula in the SYM2 region.

Authors:  Gustavo Gualtieri; Olga Kulikova; Erik Limpens; Dong-Jin Kim; Douglas R Cook; Ton Bisselin; René Geurts
Journal:  Plant Mol Biol       Date:  2002-09       Impact factor: 4.076

9.  Expressed sequence tags from a wheat-rye translocation line (2BS/2RL) infested by larvae of Hessian fly [Mayetiola destructor (Say)].

Authors:  C S Jang; J Y Kim; J W Haam; M S Lee; D S Kim; Y W Li; Y W Seo
Journal:  Plant Cell Rep       Date:  2003-07-04       Impact factor: 4.570

10.  Novel gene expression profiles define the metabolic and physiological processes characteristic of wood and its extractive formation in a hardwood tree species, Robinia pseudoacacia.

Authors:  Jaemo Yang; Sunchung Park; D Pascal Kamdem; Daniel E Keathley; Ernest Retzel; Charlie Paule; Vivek Kapur; Kyung-Hwan Han
Journal:  Plant Mol Biol       Date:  2003-07       Impact factor: 4.076

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