Literature DB >> 9696304

Neurons and fractals: how reliable and useful are calculations of fractal dimensions?

H F Jelinek1, E Fernandez.   

Abstract

In the past 15 years it has become possible to determine the fractal dimension (Df) of complex objects, including neurons, by automated image analysis methods. However, there are many unresolved issues that need to be addressed. In this paper we discuss how the Df calculated by different methods may vary and how fractal analysis may be of use for retinal ganglion cell characterization. The goal of this work was to acknowledge inherent sources of variation during measurement and evaluate current fractal analysis methods for describing structure. Our results show that different algorithms and even the same algorithm performed by different computer programs and/or experimenters may give different but consistent numerical values. All described methods demonstrated their suitability for classifying cat retinal ganglion cells into distinct groups. Our results reinforce the idea that comparison of measurements of different profiles using the same measurement method may be useful and valid even if an exact numeric value of the dimension is not realised in practice.

Mesh:

Year:  1998        PMID: 9696304     DOI: 10.1016/s0165-0270(98)00021-1

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  16 in total

1.  Development of rat CA1 neurones in acute versus organotypic slices: role of experience in synaptic morphology and activity.

Authors:  Anna De Simoni; Claudius B Griesinger; Frances A Edwards
Journal:  J Physiol       Date:  2003-07-01       Impact factor: 5.182

2.  Maximization of the connectivity repertoire as a statistical principle governing the shapes of dendritic arbors.

Authors:  Quan Wen; Armen Stepanyants; Guy N Elston; Alexander Y Grosberg; Dmitri B Chklovskii
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-21       Impact factor: 11.205

3.  Assessment and comparison of neural morphology through metrical feature extraction and analysis in neuron and neuron-glia cultures.

Authors:  L Billeci; G Pioggia; F Vaglini; A Ahluwalia
Journal:  J Biol Phys       Date:  2009-04-29       Impact factor: 1.365

Review 4.  Lung cancer-a fractal viewpoint.

Authors:  Frances E Lennon; Gianguido C Cianci; Nicole A Cipriani; Thomas A Hensing; Hannah J Zhang; Chin-Tu Chen; Septimiu D Murgu; Everett E Vokes; Michael W Vannier; Ravi Salgia
Journal:  Nat Rev Clin Oncol       Date:  2015-07-14       Impact factor: 66.675

Review 5.  A healthy dose of chaos: Using fractal frameworks for engineering higher-fidelity biomedical systems.

Authors:  Anastasia Korolj; Hau-Tieng Wu; Milica Radisic
Journal:  Biomaterials       Date:  2019-07-15       Impact factor: 12.479

6.  Patterning of endocytic vesicles and its control by voltage-gated Na+ channel activity in rat prostate cancer cells: fractal analyses.

Authors:  Monika Krasowska; Zbigniew J Grzywna; Maria E Mycielska; Mustafa B A Djamgoz
Journal:  Eur Biophys J       Date:  2004-03-16       Impact factor: 1.733

7.  Self-organization of developing embryo using scale-invariant approach.

Authors:  Ali Tiraihi; Mujtaba Tiraihi; Taki Tiraihi
Journal:  Theor Biol Med Model       Date:  2011-06-03       Impact factor: 2.432

8.  Analyzing self-similar and fractal properties of the C. elegans neural network.

Authors:  Tyler M Reese; Antoni Brzoska; Dylan T Yott; Daniel J Kelleher
Journal:  PLoS One       Date:  2012-10-05       Impact factor: 3.240

9.  Quantitating the subtleties of microglial morphology with fractal analysis.

Authors:  Audrey Karperien; Helmut Ahammer; Herbert F Jelinek
Journal:  Front Cell Neurosci       Date:  2013-01-30       Impact factor: 5.505

10.  Protocadherins mediate dendritic self-avoidance in the mammalian nervous system.

Authors:  Julie L Lefebvre; Dimitar Kostadinov; Weisheng V Chen; Tom Maniatis; Joshua R Sanes
Journal:  Nature       Date:  2012-08-23       Impact factor: 49.962

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