Literature DB >> 9681025

Psl: a novel Spm-like transposable element from Petunia hybrida.

K C Snowden1, C A Napoli.   

Abstract

The identification of a spontaneous mutable Hf1 allele in Petunia hybrida provided an opportunity to isolate and characterize a novel transposable element. This 9.9 kb element has features in common with members of the Spm family, such as homologous terminal inverted repeats and a 3 bp target site direct duplication within the Hf1 gene. The element is named Petunia Spm-like (Psl). The footprints left by excising elements have been isolated from several germinal revertants and sequence analysis shows similarities to those left by other Spm family members. Southern analysis shows that the transposon is present at low copy number in the genome of different inbred lines and species of Petunia. The germinal excision frequency of Psl was 21-33% in outcross populations. The element appears to be very mobile somatically in the inbred line V26, with 38% of plants from an inbred population showing new Psl-hybridizing bands by Southern analysis. The high somatic and germinal excision frequency demonstrated by Psl suggests that this element may have utility for gene tagging in petunia.

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Year:  1998        PMID: 9681025     DOI: 10.1046/j.1365-313x.1998.00098.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  28 in total

1.  Survival of Tdc transposable elements of the En/Spm superfamily in the carrot genome.

Authors:  Y Itoh; M Hasebe; E Davies; J Takeda; Y Ozeki
Journal:  Mol Genet Genomics       Date:  2003-02-12       Impact factor: 3.291

2.  Genomic characterization of Rim2/Hipa elements reveals a CACTA-like transposon superfamily with unique features in the rice genome.

Authors:  G-D Wang; P-F Tian; Z-K Cheng; G Wu; J-M Jiang; D-B Li; Q Li; Z-H He
Journal:  Mol Genet Genomics       Date:  2003-09-26       Impact factor: 3.291

3.  The regulatory regions required for B' paramutation and expression are located far upstream of the maize b1 transcribed sequences.

Authors:  Maike Stam; Christiane Belele; Wusirika Ramakrishna; Jane E Dorweiler; Jeffrey L Bennetzen; Vicki L Chandler
Journal:  Genetics       Date:  2002-10       Impact factor: 4.562

4.  Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements.

Authors:  M Lescot; S Rombauts; J Zhang; S Aubourg; C Mathé; S Jansson; P Rouzé; W Boerjan
Journal:  Theor Appl Genet       Date:  2004-04-14       Impact factor: 5.699

5.  A single-base substitution suppresses flower color mutation caused by a novel miniature inverted-repeat transposable element in gentian.

Authors:  Masahiro Nishihara; Takashi Hikage; Eri Yamada; Takashi Nakatsuka
Journal:  Mol Genet Genomics       Date:  2011-10-15       Impact factor: 3.291

6.  Two different transposable elements inserted in flavonoid 3',5'-hydroxylase gene contribute to pink flower coloration in Gentiana scabra.

Authors:  Takashi Nakatsuka; Masahiro Nishihara; Keiichiro Mishiba; Hiroshi Hirano; Saburo Yamamura
Journal:  Mol Genet Genomics       Date:  2005-12-14       Impact factor: 3.291

7.  Gene loss and parallel evolution contribute to species difference in flower color.

Authors:  Stacey D Smith; Mark D Rausher
Journal:  Mol Biol Evol       Date:  2011-05-06       Impact factor: 16.240

8.  Molecular characterization of a mutable pigmentation phenotype and isolation of the first active transposable element from Sorghum bicolor.

Authors:  S Chopra; V Brendel; J Zhang; J D Axtell; T Peterson
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

9.  Environmental control of branching in petunia.

Authors:  Revel S M Drummond; Bart J Janssen; Zhiwei Luo; Carla Oplaat; Susan E Ledger; Mark W Wohlers; Kimberley C Snowden
Journal:  Plant Physiol       Date:  2015-04-24       Impact factor: 8.340

10.  A putative autonomous 20.5 kb-CACTA transposon insertion in an F3'H allele identifies a new CACTA transposon subfamily in Glycine max.

Authors:  Gracia Zabala; Lila Vodkin
Journal:  BMC Plant Biol       Date:  2008-12-02       Impact factor: 4.215

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