Literature DB >> 9671818

Dimerization and HMG box domains 1-3 present in Xenopus UBF are sufficient for its role in transcriptional enhancement.

G J Sullivan1, B McStay.   

Abstract

Transcription of Xenopus ribosomal genes by RNA polymerase I is directed by a stable transcription complex that forms on the gene promoter. This complex is comprised of the HMG box factor UBF and the TBP-containing complex Rib1. Repeated sequence elements found upstream of the ribosomal gene promoter act as RNA polymerase I-specific trans-criptional enhancers. These enhancers function by increasing the probability of a stable transcription complex forming on the adjacent promoter. UBF is required for enhancer function. This role in enhancement is distinct from that at the promoter and does not involve translocation of UBF from enhancer repeats to the promoter. Here we utilize an in vitro system to demonstrate that a combination of the dimerization domain of UBF and HMG boxes 1-3 are sufficient to specify its role in enhancement. We also demonstrate that the acidic C-terminus of UBF is primarilyresponsible for its observed interaction with Rib1. Thus, we have uncoupled the Rib1 interaction and enhancer functions of UBF and can conclude that direct interaction with Rib1 is not a prerequisite for the enhancer function of UBF.

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Year:  1998        PMID: 9671818      PMCID: PMC147741          DOI: 10.1093/nar/26.15.3555

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  37 in total

1.  The scs and scs' insulator elements impart a cis requirement on enhancer-promoter interactions.

Authors:  J E Krebs; M Dunaway
Journal:  Mol Cell       Date:  1998-01       Impact factor: 17.970

2.  Half helical turn spacing changes convert a frog into a mouse rDNA promoter: a distant upstream domain determines the helix face of the initiation site.

Authors:  L K Pape; J J Windle; B Sollner-Webb
Journal:  Genes Dev       Date:  1990-01       Impact factor: 11.361

3.  Functional cooperativity between transcription factors UBF1 and SL1 mediates human ribosomal RNA synthesis.

Authors:  S P Bell; R M Learned; H M Jantzen; R Tjian
Journal:  Science       Date:  1988-09-02       Impact factor: 47.728

4.  Factors and nucleotide sequences that direct ribosomal DNA transcription and their relationship to the stable transcription complex.

Authors:  J Tower; V C Culotta; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  1986-10       Impact factor: 4.272

5.  Enhancer-like properties of the 60/81 bp elements in the ribosomal gene spacer of Xenopus laevis.

Authors:  P Labhart; R H Reeder
Journal:  Cell       Date:  1984-05       Impact factor: 41.582

6.  The Xenopus ribosomal gene enhancers bind an essential polymerase I transcription factor, xUBF.

Authors:  C S Pikaard; B McStay; M C Schultz; S P Bell; R H Reeder
Journal:  Genes Dev       Date:  1989-11       Impact factor: 11.361

7.  Spacer sequences regulate transcription of ribosomal gene plasmids injected into Xenopus embryos.

Authors:  S J Busby; R H Reeder
Journal:  Cell       Date:  1983-10       Impact factor: 41.582

8.  Fractionation and reconstitution of factors required for accurate transcription of mammalian ribosomal RNA genes: identification of a species-dependent initiation factor.

Authors:  Y Mishima; I Financsek; R Kominami; M Muramatsu
Journal:  Nucleic Acids Res       Date:  1982-11-11       Impact factor: 16.971

9.  Spacer regulation of Xenopus ribosomal gene transcription: competition in oocytes.

Authors:  R H Reeder; J G Roan; M Dunaway
Journal:  Cell       Date:  1983-12       Impact factor: 41.582

10.  Characterization of three sites of RNA 3' end formation in the Xenopus ribosomal gene spacer.

Authors:  P Labhart; R H Reeder
Journal:  Cell       Date:  1986-05-09       Impact factor: 41.582

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  2 in total

1.  DNA looping in the RNA polymerase I enhancesome is the result of non-cooperative in-phase bending by two UBF molecules.

Authors:  V Y Stefanovsky; G Pelletier; D P Bazett-Jones; C Crane-Robinson; T Moss
Journal:  Nucleic Acids Res       Date:  2001-08-01       Impact factor: 16.971

Review 2.  Functional Diversity of Non-Histone Chromosomal Protein HmgB1.

Authors:  Elena Chikhirzhina; Tatyana Starkova; Anton Beljajev; Alexander Polyanichko; Alexey Tomilin
Journal:  Int J Mol Sci       Date:  2020-10-26       Impact factor: 5.923

  2 in total

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