Literature DB >> 9667994

Molecular versus taxonomic rates of evolution in planktonic foraminifera.

C de Vargas1, J Pawlowski.   

Abstract

Neogene planktonic foraminifera are among the most widely used microfossils in the study of tempo and mode of evolution. Comparisons of taxonomic rates between the two major clades in this group have shown that the nonspinose globorotaliids have undergone a significantly more rapid evolutionary turnover than the spinose globigerinids (S. M. Stanley et al., 1988, Paleobiology 14, 235-249). In order to test if similar fluctuations are observed in molecular data, we have used different methods to calculate absolute and relative rates of substitutions based on 16 partial SSU rDNA sequences from representatives of both groups. According to our data, rates of substitution are relatively constant within the globigerinids with a mean value of 4.3 subst./site/10(9) years, but vary in the globorotaliid clade with three species having a rate of about 1 subst./site/10(9) years and two species evolving much faster with rates of more than 7 subst./site/10(9) years. Assuming that the fast rates result from recent accelerations, the globorotaliids have basically much slower molecular evolutionary rates than the globigerinids, in opposition to the fossil data. Copyright 1998 Academic Press.

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Year:  1998        PMID: 9667994     DOI: 10.1006/mpev.1998.0491

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  7 in total

1.  Molecular evidence of cryptic speciation in planktonic foraminifers and their relation to oceanic provinces.

Authors:  C de Vargas; R Norris; L Zaninetti; S W Gibb; J Pawlowski
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

2.  Using the Multiple Analysis Approach to Reconstruct Phylogenetic Relationships among Planktonic Foraminifera from Highly Divergent and Length-polymorphic SSU rDNA Sequences.

Authors:  Ralf Aurahs; Markus Göker; Guido W Grimm; Vera Hemleben; Christoph Hemleben; Ralf Schiebel; Michal Kucera
Journal:  Bioinform Biol Insights       Date:  2009-11-11

3.  A Clustering Optimization Strategy for Molecular Taxonomy Applied to Planktonic Foraminifera SSU rDNA.

Authors:  Markus Göker; Guido W Grimm; Alexander F Auch; Ralf Aurahs; Michal Kučera
Journal:  Evol Bioinform Online       Date:  2010-09-09       Impact factor: 1.625

4.  SSU rDNA divergence in planktonic foraminifera: molecular taxonomy and biogeographic implications.

Authors:  Aurore André; Frédéric Quillévéré; Raphaël Morard; Yurika Ujiié; Gilles Escarguel; Colomban de Vargas; Thibault de Garidel-Thoron; Christophe J Douady
Journal:  PLoS One       Date:  2014-08-13       Impact factor: 3.240

5.  Evolution of a Planktonic Foraminifer during Environmental Changes in the Tropical Oceans.

Authors:  Yurika Ujiié; Yoshiyuki Ishitani
Journal:  PLoS One       Date:  2016-02-17       Impact factor: 3.240

6.  Surface ocean metabarcoding confirms limited diversity in planktonic foraminifera but reveals unknown hyper-abundant lineages.

Authors:  Raphaël Morard; Marie-José Garet-Delmas; Frédéric Mahé; Sarah Romac; Julie Poulain; Michal Kucera; Colomban de Vargas
Journal:  Sci Rep       Date:  2018-02-07       Impact factor: 4.379

7.  Integrated species-phenon trees: visualizing infraspecific diversity within lineages.

Authors:  Abdullah Khan Zehady; Barry G Fordham; James G Ogg
Journal:  Sci Rep       Date:  2019-12-12       Impact factor: 4.379

  7 in total

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