Literature DB >> 9666060

Sequence analysis of a 40-kb Arabidopsis thaliana genomic region located at the top of chromosome 1.

N Terryn1, J Gielen, A De Keyser, H Van Den Daele, W Ardiles, P Neyt, R De Clercq, J Coppieters, P Déhais, R Villarroel, P Rouzé, M Van Montagu.   

Abstract

As a contribution to the European Scientists Sequencing Arabidopsis (BIOTECH ESSA) project, a contig of almost 40kb has been sequenced at the extreme top of chromosome 1, around the Arabidopsis thaliana gene coding for a member of the 1-aminocyclopropane-1-carboxylate synthesis gene family. The region contains, besides the ACS1 gene itself, 10 putative genes, all new for Arabidopsis. Among these are three genes encoding kinases, a late embryogenesis-abundant protein, a MADS box-containing protein, a dehydrogenase, and a Myb-related transcription factor. In addition, six cDNAs have been sequenced that correspond to this region.

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Year:  1998        PMID: 9666060     DOI: 10.1016/s0378-1119(98)00286-8

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  6 in total

1.  Identification and analysis of Arabidopsis expressed sequence tags characteristic of non-coding RNAs.

Authors:  G C MacIntosh; C Wilkerson; P J Green
Journal:  Plant Physiol       Date:  2001-11       Impact factor: 8.340

2.  Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway.

Authors:  Sarah Fowler; Michael F Thomashow
Journal:  Plant Cell       Date:  2002-08       Impact factor: 11.277

3.  Fine sequence analysis of 60 kb around the Arabidopsis thaliana AtEm1 locus on chromosome III.

Authors:  P Comella; H J Wu; M Laudie; C Berger; R Cooke; M Delseny; F Grellet
Journal:  Plant Mol Biol       Date:  1999-11       Impact factor: 4.076

4.  The ANGUSTIFOLIA gene of Arabidopsis, a plant CtBP gene, regulates leaf-cell expansion, the arrangement of cortical microtubules in leaf cells and expression of a gene involved in cell-wall formation.

Authors:  Gyung-Tae Kim; Keiko Shoda; Tomohiko Tsuge; Kiu-Hyung Cho; Hirofumi Uchimiya; Ryusuke Yokoyama; Kazuhiko Nishitani; Hirokazu Tsukaya
Journal:  EMBO J       Date:  2002-03-15       Impact factor: 11.598

5.  Analysis of antisense expression by whole genome tiling microarrays and siRNAs suggests mis-annotation of Arabidopsis orphan protein-coding genes.

Authors:  Casey R Richardson; Qing-Jun Luo; Viktoria Gontcharova; Ying-Wen Jiang; Manoj Samanta; Eunseog Youn; Christopher D Rock
Journal:  PLoS One       Date:  2010-05-26       Impact factor: 3.240

6.  A natural antisense transcript of the Petunia hybrida Sho gene suggests a role for an antisense mechanism in cytokinin regulation.

Authors:  Elena Zubko; Peter Meyer
Journal:  Plant J       Date:  2007-10-25       Impact factor: 6.417

  6 in total

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