Literature DB >> 9660961

FRA10B structure reveals common elements in repeat expansion and chromosomal fragile site genesis.

D R Hewett1, O Handt, L Hobson, M Mangelsdorf, H J Eyre, E Baker, G R Sutherland, S Schuffenhauer, J I Mao, R I Richards.   

Abstract

A common mechanism for chromosomal fragile site genesis is not yet apparent. Folate-sensitive fragile sites are expanded p(CCG)n repeats that arise from longer normal alleles. Distamycin A or bromodeoxyuridine-inducible fragile site FRA16B is an expanded AT-rich approximately 33 bp repeat; however, the relationship between normal and fragile site alleles is not known. Here, we report that bromodeoxyuridine-inducible, distamycin A-insensitive fragile site FRA10B is composed of expanded approximately 42 bp repeats. Differences in repeat motif length or composition between different FRA10B families indicate multiple independent expansion events. Some FRA10B alleles comprise a mixture of different expanded repeat motifs. FRA10B fragile site and long normal alleles share flanking polymorphisms. Somatic and intergenerational FRA10B repeat instability analogous to that found in expanded trinucleotide repeats supports dynamic mutation as a common mechanism for repeat expansion.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9660961     DOI: 10.1016/s1097-2765(00)80077-5

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  29 in total

1.  Homozygotes for FRA16B are normal.

Authors:  T Hocking; W Feichtinger; M Schmid; E A Haan; E Baker; G R Sutherland
Journal:  Chromosome Res       Date:  1999       Impact factor: 5.239

2.  Analysis of replication timing at the FRA10B and FRA16B fragile site loci.

Authors:  O Handt; E Baker; S Dayan; S M Gartler; E Woollatt; R I Richards; R S Hansen
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

3.  Molecular basis for expression of common and rare fragile sites.

Authors:  Eitan Zlotorynski; Ayelet Rahat; Jennifer Skaug; Neta Ben-Porat; Efrat Ozeri; Ruth Hershberg; Ayala Levi; Stephen W Scherer; Hanah Margalit; Batsheva Kerem
Journal:  Mol Cell Biol       Date:  2003-10       Impact factor: 4.272

4.  Matrix attachment region (MAR) properties and abnormal expansion of AT island minisatellites in FRA16B fragile sites in leukemic CEM cells.

Authors:  Jennifer A Jackson; Alex V Trevino; Maryanne C Herzig; Terence S Herman; Jan M Woynarowski
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

5.  A palindrome-mediated mechanism distinguishes translocations involving LCR-B of chromosome 22q11.2.

Authors:  Anthony L Gotter; Tamim H Shaikh; Marcia L Budarf; C Harker Rhodes; Beverly S Emanuel
Journal:  Hum Mol Genet       Date:  2003-11-12       Impact factor: 6.150

6.  Molecular cloning of a translocation breakpoint hotspot in 22q11.

Authors:  Hiroki Kurahashi; Hidehito Inagaki; Eriko Hosoba; Takema Kato; Tamae Ohye; Hiroshi Kogo; Beverly S Emanuel
Journal:  Genome Res       Date:  2007-01-31       Impact factor: 9.043

Review 7.  Comparative genomics and molecular dynamics of DNA repeats in eukaryotes.

Authors:  Guy-Franck Richard; Alix Kerrest; Bernard Dujon
Journal:  Microbiol Mol Biol Rev       Date:  2008-12       Impact factor: 11.056

Review 8.  The role of fork stalling and DNA structures in causing chromosome fragility.

Authors:  Simran Kaushal; Catherine H Freudenreich
Journal:  Genes Chromosomes Cancer       Date:  2019-01-29       Impact factor: 5.006

Review 9.  The biological effects of simple tandem repeats: lessons from the repeat expansion diseases.

Authors:  Karen Usdin
Journal:  Genome Res       Date:  2008-07       Impact factor: 9.043

Review 10.  Fragile sites-cytogenetic similarity with molecular diversity.

Authors:  G R Sutherland; R I Richards
Journal:  Am J Hum Genet       Date:  1999-02       Impact factor: 11.025

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.