Literature DB >> 9617803

The gene encoding T protein of the glycine decarboxylase complex involved in the mitochondrial step of the photorespiratory pathway in plants exhibits features of light-induced genes.

P Vauclare1, D Macherel, R Douce, J Bourguignon.   

Abstract

We have isolated and characterized a genomic clone encoding the 41 kDa monomer T-protein. This gene called gdcT spans approximately 3 kbp and is composed of four exons interrupted by three introns (321, 691 and 114 bp). The splice sites for donor and acceptor are in agreement with the canonical GT/AG rule. Primer extension strongly suggests the presence of two major transcription start sites. The first transcription start site around 43 bases downstream of a putative TATA box was assigned the +1 position. The second (+31) is not correlated with a putative TATA box, but revealed a pyrimidine-rich region which is very similar to the initiator element. Sequence analysis of the 5'-upstream region of the gene reveals three consensus regions found in the nuclear genes encoding the chloroplastic proteins of ribulose-1,5-bisphosphate carboxylase (rbcS) and the chlorophyll a/b-binding protein (cab) such as an AT-rich sequence localized at -539 to -530, a box II core sequence GGTTAA (-123 to -118) and between -364 and -354 a tandem GATA motif. These elements are known to be involved respectively in the regulation of light-responsiveness and cell-type specificity expression of plant genes. Gel shift assays indicate that the box II core sequence could bind protein nuclear factors similar to the trans-acting factor which interact with corresponding promoter region of rbcS gene.

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Year:  1998        PMID: 9617803     DOI: 10.1023/a:1005954200042

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  47 in total

1.  Isolation and sequence determination of cDNA encoding T-protein of the glycine cleavage system.

Authors:  K Okamura-Ikeda; K Fujiwara; M Yamamoto; K Hiraga; Y Motokawa
Journal:  J Biol Chem       Date:  1991-03-15       Impact factor: 5.157

2.  Novel cis-acting elements in Petunia Cab gene promoters.

Authors:  D Gidoni; P Brosio; D Bond-Nutter; J Bedbrook; P Dunsmuir
Journal:  Mol Gen Genet       Date:  1989-01

3.  Purification and primary amino acid sequence of the L subunit of glycine decarboxylase. Evidence for a single lipoamide dehydrogenase in plant mitochondria.

Authors:  S R Turner; R Ireland; S Rawsthorne
Journal:  J Biol Chem       Date:  1992-04-15       Impact factor: 5.157

4.  Transcriptional activation by Sp1 as directed through TATA or initiator: specific requirement for mammalian transcription factor IID.

Authors:  S T Smale; M C Schmidt; A J Berk; D Baltimore
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

5.  Molecular characterization and genetic mapping of two clusters of genes encoding chlorophyll a/b-binding proteins in Lycopersicon esculentum (tomato).

Authors:  E Pichersky; R Bernatzky; S D Tanksley; R B Breidenbach; A P Kausch; A R Cashmore
Journal:  Gene       Date:  1985       Impact factor: 3.688

6.  Glycine decarboxylase complex from higher plants. Molecular cloning, tissue distribution and mass spectrometry analyses of the T protein.

Authors:  J Bourguignon; P Vauclare; V Merand; E Forest; M Neuburger; R Douce
Journal:  Eur J Biochem       Date:  1993-10-01

7.  A novel DNA-binding domain in the Shrunken initiator-binding protein (IBP1).

Authors:  T Lugert; W Werr
Journal:  Plant Mol Biol       Date:  1994-06       Impact factor: 4.076

8.  cDNA cloning, primary structure and gene expression for H-protein, a component of the glycine-cleavage system (glycine decarboxylase) of pea (Pisum sativum) leaf mitochondria.

Authors:  D Macherel; M Lebrun; J Gagnon; M Neuburger; R Douce
Journal:  Biochem J       Date:  1990-06-15       Impact factor: 3.857

9.  Expression dynamics of the pea rbcS multigene family and organ distribution of the transcripts.

Authors:  Robert Fluhr; Phyllis Moses; Giorgio Morelli; Gloria Coruzzi; Nam-Hai Chua
Journal:  EMBO J       Date:  1986-09       Impact factor: 11.598

10.  Selection of AUG initiation codons differs in plants and animals.

Authors:  H A Lütcke; K C Chow; F S Mickel; K A Moss; H F Kern; G A Scheele
Journal:  EMBO J       Date:  1987-01       Impact factor: 11.598

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  6 in total

1.  Mitochondrial biogenesis and function in Arabidopsis.

Authors:  A Harvey Millar; Ian D Small; David A Day; James Whelan
Journal:  Arabidopsis Book       Date:  2008-07-09

2.  Control of Mitochondrial Function via Photosynthetic Redox Signals.

Authors:  Robert van Lis; Ariane Atteia
Journal:  Photosynth Res       Date:  2004-02       Impact factor: 3.573

3.  Characterization of two cDNAs encoding mitochondrial lipoamide dehydrogenase from Arabidopsis.

Authors:  I Lutziger; D J Oliver
Journal:  Plant Physiol       Date:  2001-10       Impact factor: 8.340

4.  Light regulation of the Arabidopsis respiratory chain. Multiple discrete photoreceptor responses contribute to induction of type II NAD(P)H dehydrogenase genes.

Authors:  Matthew A Escobar; Keara A Franklin; A Staffan Svensson; Michael G Salter; Garry C Whitelam; Allan G Rasmusson
Journal:  Plant Physiol       Date:  2004-08-27       Impact factor: 8.340

5.  Design and Analysis of Native Photorespiration Gene Motifs of Promoter Untranslated Region Combinations Under Short Term Abiotic Stress Conditions.

Authors:  Debarati Basu; Paul F South
Journal:  Front Plant Sci       Date:  2022-02-16       Impact factor: 5.753

6.  The Landscape of Autophagy-Related (ATG) Genes and Functional Characterization of TaVAMP727 to Autophagy in Wheat.

Authors:  Wenjie Yue; Haobin Zhang; Xuming Sun; Ning Su; Qi Zhao; Zhaogui Yan; Song Weining; Hong Yue
Journal:  Int J Mol Sci       Date:  2022-01-14       Impact factor: 5.923

  6 in total

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