Literature DB >> 9612078

The danger of metabolic pathways with turbo design.

B Teusink1, M C Walsh, K van Dam, H V Westerhoff.   

Abstract

Many catabolic pathways begin with an ATP-requiring activation step, after which further metabolism yields a surplus of ATP. Such a 'turbo' principle is useful but also contains an inherent risk. This is illustrated by a detailed kinetic analysis of a paradoxical Saccharomyces cerevisiae mutant; the mutant fails to grow on glucose because of overactive initial enzymes of glycolysis, but is defective only in an enzyme (trehalose 6-phosphate synthase) that appears to have little relevance to glycolysis. The ubiquity of pathways that possess an initial activation step, suggests that there might be many more genes that, when deleted, cause rather paradoxical regulation phenotypes (i.e. growth defects caused by enhanced utilization of growth substrate).

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 9612078     DOI: 10.1016/s0968-0004(98)01205-5

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  64 in total

1.  Compartmentation protects trypanosomes from the dangerous design of glycolysis.

Authors:  B M Bakker; F I Mensonides; B Teusink; P van Hoek; P A Michels; H V Westerhoff
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

2.  Expression of genes encoding F(1)-ATPase results in uncoupling of glycolysis from biomass production in Lactococcus lactis.

Authors:  Brian J Koebmann; Christian Solem; Martin B Pedersen; Dan Nilsson; Peter R Jensen
Journal:  Appl Environ Microbiol       Date:  2002-09       Impact factor: 4.792

Review 3.  Metabolic profiles to define the genome: can we hear the phenotypes?

Authors:  Julian L Griffin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-06-29       Impact factor: 6.237

4.  What it takes to understand and cure a living system: computational systems biology and a systems biology-driven pharmacokinetics-pharmacodynamics platform.

Authors:  Maciej Swat; Szymon M Kiełbasa; Sebastian Polak; Brett Olivier; Frank J Bruggeman; Mark Quinton Tulloch; Jacky L Snoep; Arthur J Verhoeven; Hans V Westerhoff
Journal:  Interface Focus       Date:  2010-12-08       Impact factor: 3.906

5.  A novel phosphatase cascade regulates differentiation in Trypanosoma brucei via a glycosomal signaling pathway.

Authors:  Balázs Szöor; Irene Ruberto; Richard Burchmore; Keith R Matthews
Journal:  Genes Dev       Date:  2010-06-15       Impact factor: 11.361

Review 6.  Systems biology from micro-organisms to human metabolic diseases: the role of detailed kinetic models.

Authors:  Barbara M Bakker; Karen van Eunen; Jeroen A L Jeneson; Natal A W van Riel; Frank J Bruggeman; Bas Teusink
Journal:  Biochem Soc Trans       Date:  2010-10       Impact factor: 5.407

7.  Homeostasis and the glycogen shunt explains aerobic ethanol production in yeast.

Authors:  Robert G Shulman; Douglas L Rothman
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

8.  A critical view of metabolic network adaptations.

Authors:  Balázs Papp; Bas Teusink; Richard A Notebaart
Journal:  HFSP J       Date:  2008-12-03

9.  Compartmentation prevents a lethal turbo-explosion of glycolysis in trypanosomes.

Authors:  Jurgen R Haanstra; Arjen van Tuijl; Peter Kessler; Willem Reijnders; Paul A M Michels; Hans V Westerhoff; Marilyn Parsons; Barbara M Bakker
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-13       Impact factor: 11.205

10.  A modified Saccharomyces cerevisiae strain that consumes L-Arabinose and produces ethanol.

Authors:  Jessica Becker; Eckhard Boles
Journal:  Appl Environ Microbiol       Date:  2003-07       Impact factor: 4.792

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.