Literature DB >> 9578454

Atomic mutations in annexin V--thermodynamic studies of isomorphous protein variants.

N Budisa1, R Huber, R Golbik, C Minks, E Weyher, L Moroder.   

Abstract

We have recently developed methods for specific and high-level replacement of methionine with 2-aminohexanoic acid, selenomethionine and telluromethionine as isosteric and atomic analogues for structural investigations of human recombinant annexin V. The variants formed isomorphic crystals and retained the parent three-dimensional fold and bioactivities. Folding parameters were determined from thermal and chemical unfolding to partially denatured states. Stabilities estimated from guanidinium chloride unfolding equilibria are not changed significantly for the atomic mutants (S-->Se-->Te) while the denaturation midpoint is shifted toward lower values with an increase of the m values at the increase of hydrophobicity. In contrast, stabilities in urea are considerably affected by the atomic substitutions, decreasing together with the m and [D]1/2 values. The methylene and selenium variants are identical within the limits of error of all measurements performed here. The physical parameters of the amino acid analogues and the values derived from the slopes of the unfolding data are highly correlated. This approach demonstrates how systematic variations in atomic number at the site of replacement (atomic mutations) can provide a method to probe specific folding properties of proteins.

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Year:  1998        PMID: 9578454     DOI: 10.1046/j.1432-1327.1998.2530001.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  11 in total

1.  Conformational stability and warfarin-binding properties of human serum albumin studied by recombinant mutants.

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2.  Proteins with beta-(thienopyrrolyl)alanines as alternative chromophores and pharmaceutically active amino acids.

Authors:  N Budisa; S Alefelder; J H Bae; R Golbik; C Minks; R Huber; L Moroder
Journal:  Protein Sci       Date:  2001-07       Impact factor: 6.725

3.  Stability of domain 4 of the anthrax toxin protective antigen and the effect of the VWA domain of CMG2 on stability.

Authors:  Sireesha Mamillapalli; Masaru Miyagi; James G Bann
Journal:  Protein Sci       Date:  2017-02       Impact factor: 6.725

4.  Mutation of high-affinity methionine permease contributes to selenomethionyl protein production in Saccharomyces cerevisiae.

Authors:  Toshihiko Kitajima; Yasunori Chiba; Yoshifumi Jigami
Journal:  Appl Environ Microbiol       Date:  2010-08-06       Impact factor: 4.792

5.  Thermodynamic effects of noncoded and coded methionine substitutions in calmodulin.

Authors:  Aaron P Yamniuk; Hiroaki Ishida; Dustin Lippert; Hans J Vogel
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

6.  Design of anti- and pro-aggregation variants to assess the effects of methionine oxidation in human prion protein.

Authors:  Christina Wolschner; Armin Giese; Hans A Kretzschmar; Robert Huber; Luis Moroder; Nediljko Budisa
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-28       Impact factor: 11.205

7.  Selenomethionine incorporation into amyloid sequences regulates fibrillogenesis and toxicity.

Authors:  Javier Martínez; Silvia Lisa; Rosa Sánchez; Wioleta Kowalczyk; Esther Zurita; Meritxell Teixidó; Ernest Giralt; David Andreu; Jesús Avila; María Gasset
Journal:  PLoS One       Date:  2011-11-22       Impact factor: 3.240

Review 8.  Biochemistry of fluoroprolines: the prospect of making fluorine a bioelement.

Authors:  Vladimir Kubyshkin; Rebecca Davis; Nediljko Budisa
Journal:  Beilstein J Org Chem       Date:  2021-02-15       Impact factor: 2.883

9.  Norvaline is accumulated after a down-shift of oxygen in Escherichia coli W3110.

Authors:  Jaakko Soini; Christina Falschlehner; Christina Liedert; Jörg Bernhardt; Jussi Vuoristo; Peter Neubauer
Journal:  Microb Cell Fact       Date:  2008-10-21       Impact factor: 5.328

10.  Probing the active site tryptophan of Staphylococcus aureus thioredoxin with an analog.

Authors:  Markus Englert; Akiyoshi Nakamura; Yane-Shih Wang; Daniel Eiler; Dieter Söll; Li-Tao Guo
Journal:  Nucleic Acids Res       Date:  2015-11-17       Impact factor: 16.971

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