Literature DB >> 9559554

The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae.

R J Planta1, W H Mager.   

Abstract

Screening of the complete genome sequence from the yeast Saccharomyces cerevisiae has enabled us to compile a complete list of the genes encoding cytoplasmic ribosomal proteins in this organism. Putative ribosomal protein genes were selected primarily on the basis of the sequence similarity of their products with ribosomal proteins from other eukaryotic organisms, in particular the rat. These genes were subsequently screened for typical yeast rp-gene characteristics, viz. (1) a high codon adaptation index; (2) their promoter structure and (3) their responses to changes in growth conditions. The yeast genome appears to carry 78 different genes, of which 59 are duplicated, encoding 32 different small-subunit and 46 large-subunit proteins. A new nomenclature for these ribosomal proteins is proposed.

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Year:  1998        PMID: 9559554     DOI: 10.1002/(SICI)1097-0061(19980330)14:5<471::AID-YEA241>3.0.CO;2-U

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  92 in total

Review 1.  Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae.

Authors:  D Kressler; P Linder; J de La Cruz
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

2.  Precision and functional specificity in mRNA decay.

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-23       Impact factor: 11.205

3.  Ribosomal protein L2 is involved in the association of the ribosomal subunits, tRNA binding to A and P sites and peptidyl transfer.

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Journal:  EMBO J       Date:  2000-10-02       Impact factor: 11.598

4.  The yeast eIF3 subunits TIF32/a, NIP1/c, and eIF5 make critical connections with the 40S ribosome in vivo.

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5.  Identification and analysis of over 2000 ribosomal protein pseudogenes in the human genome.

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Journal:  Genome Res       Date:  2002-10       Impact factor: 9.043

6.  Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale.

Authors:  Odile Lecompte; Raymond Ripp; Jean-Claude Thierry; Dino Moras; Olivier Poch
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7.  GenomeHistory: a software tool and its application to fully sequenced genomes.

Authors:  Gavin C Conant; Andreas Wagner
Journal:  Nucleic Acids Res       Date:  2002-08-01       Impact factor: 16.971

8.  New strategy for the representation and the integration of biomolecular knowledge at a cellular scale.

Authors:  Roland Barriot; Jérôme Poix; Alexis Groppi; Aurélien Barré; Nicolas Goffard; David Sherman; Isabelle Dutour; Antoine de Daruvar
Journal:  Nucleic Acids Res       Date:  2004-07-07       Impact factor: 16.971

9.  Roles for Gcn5 in promoting nucleosome assembly and maintaining genome integrity.

Authors:  Rebecca J Burgess; Zhiguo Zhang
Journal:  Cell Cycle       Date:  2010-08-23       Impact factor: 4.534

10.  Quantitative- and phospho-proteomic analysis of the yeast response to the tyrosine kinase inhibitor imatinib to pharmacoproteomics-guided drug line extension.

Authors:  Sandra C Dos Santos; Nuno P Mira; Ana S Moreira; Isabel Sá-Correia
Journal:  OMICS       Date:  2012-07-09
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