Literature DB >> 9547275

Characterisation of Leishmania telomeres reveals unusual telomeric repeats and conserved telomere-associated sequence.

G Fu1, D C Barker.   

Abstract

Characterisation of the telomeres of Leishmania is important for understanding many aspects of the parasitic life of this primitive protozoan and for the completion of the physical map and sequencing of the genome. After sequencing more than 300 telomere-derived clones from Leishmania braziliensis and Leishmania major, a conserved 100 bp sequence was identified immediately adjacent to the telomere at the chromosome end and was named LCTAS (Leishmania conserved telomere-associated sequence). The LCTAS contains two conserved sequence boxes, and is present in all Leishmania species studied. The organisation of the LCTAS in the telomeric region differs between L. braziliensis and L. major: in L. major the LCTASs are tandemly repeated, while in L. braziliensis the LCTAS is present as a single copy per end. Two additional TASs with 1.6 kb and 274 bp repeat structures, which are apparently different to LCTAS, were isolated and mapped onto a L. braziliensis 250 kb multicopy minichromosome and the L. major chromosome 1, respectively. An unusual feature in L. braziliensis is that the telomeric repeats are often comprised of a novel tandem repeat CCCTAACCCGTGGA. A 'slippage' mechanism for LCTAS formation is proposed in this study as an alternative way for the synthesis and maintenance of telomeres and subtelomere regions.

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Year:  1998        PMID: 9547275      PMCID: PMC147527          DOI: 10.1093/nar/26.9.2161

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  25 in total

1.  The telomeric GGGTTA repeats of Trypanosoma brucei contain the hypermodified base J in both strands.

Authors:  F van Leeuwen; E R Wijsman; E Kuyl-Yeheskiely; G A van der Marel; J H van Boom; P Borst
Journal:  Nucleic Acids Res       Date:  1996-07-01       Impact factor: 16.971

Review 2.  Telomeres: beginning to understand the end.

Authors:  V A Zakian
Journal:  Science       Date:  1995-12-08       Impact factor: 47.728

3.  Rapid cloning of telomere-associated sequence using primer-tagged amplification.

Authors:  G Fu; D C Barker
Journal:  Biotechniques       Date:  1998-03       Impact factor: 1.993

4.  Increased expression of LD1 genes transcribed by RNA polymerase I in Leishmania donovani as a result of duplication into the rRNA gene locus.

Authors:  M J Lodes; G Merlin; T deVos; A Ghosh; R Madhubala; P J Myler; K Stuart
Journal:  Mol Cell Biol       Date:  1995-12       Impact factor: 4.272

5.  The role of chromosome ends during meiosis in Caenorhabditis elegans.

Authors:  C Wicky; A M Rose
Journal:  Bioessays       Date:  1996-06       Impact factor: 4.345

6.  A polymorphic minisatellite sequence in the subtelomeric regions of chromosomes I and V in Leishmania infantum.

Authors:  C Ravel; P Wincker; P Bastien; C Blaineau; M Pagès
Journal:  Mol Biochem Parasitol       Date:  1995-10       Impact factor: 1.759

7.  The Leishmania genome comprises 36 chromosomes conserved across widely divergent human pathogenic species.

Authors:  P Wincker; C Ravel; C Blaineau; M Pages; Y Jauffret; J P Dedet; P Bastien
Journal:  Nucleic Acids Res       Date:  1996-05-01       Impact factor: 16.971

8.  Telomeric repeats (TTAGGC)n are sufficient for chromosome capping function in Caenorhabditis elegans.

Authors:  C Wicky; A M Villeneuve; N Lauper; L Codourey; H Tobler; F Müller
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-20       Impact factor: 11.205

9.  ST-1, a 39-kilodalton protein in Trypanosoma brucei, exhibits a dual affinity for the duplex form of the 29-base-pair subtelomeric repeat and its C-rich strand.

Authors:  J E Eid; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  1995-01       Impact factor: 4.272

10.  The chromosome end in yeast: its mosaic nature and influence on recombinational dynamics.

Authors:  E J Louis; E S Naumova; A Lee; G Naumov; J E Haber
Journal:  Genetics       Date:  1994-03       Impact factor: 4.562

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  20 in total

1.  Leishmania major Friedlin chromosome 1 has an unusual distribution of protein-coding genes.

Authors:  P J Myler; L Audleman; T deVos; G Hixson; P Kiser; C Lemley; C Magness; E Rickel; E Sisk; S Sunkin; S Swartzell; T Westlake; P Bastien; G Fu; A Ivens; K Stuart
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

2.  Elongation of repetitive DNA by DNA polymerase from a hyperthermophilic bacterium Thermus thermophilus.

Authors:  N Ogata; H Morino
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

3.  Leishmania major chromosome 3 contains two long convergent polycistronic gene clusters separated by a tRNA gene.

Authors:  E A Worthey; Santiago Martinez-Calvillo; Achim Schnaufer; Gautam Aggarwal; Jason Cawthra; Gholam Fazelinia; Chris Fong; Guoliang Fu; Melissa Hassebrock; Greg Hixson; Alasdair C Ivens; Patti Kiser; Felicia Marsolini; Erika Rickel; Erica Rickell; Reza Salavati; Ellen Sisk; Susan M Sunkin; Kenneth D Stuart; Peter J Myler
Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

Review 4.  Repetitive elements in genomes of parasitic protozoa.

Authors:  Bill Wickstead; Klaus Ersfeld; Keith Gull
Journal:  Microbiol Mol Biol Rev       Date:  2003-09       Impact factor: 11.056

Review 5.  The central roles of telomeres and subtelomeres in antigenic variation in African trypanosomes.

Authors:  David Horn; J David Barry
Journal:  Chromosome Res       Date:  2005       Impact factor: 5.239

6.  The putative telomerase reverse transcriptase component of Leishmania amazonensis: gene cloning and characterization.

Authors:  Miriam A Giardini; Cristina B B Lira; Fábio F Conte; Luciana R Camillo; Jair L de Siqueira Neto; Carlos H I Ramos; Maria Isabel N Cano
Journal:  Parasitol Res       Date:  2006-01-14       Impact factor: 2.289

7.  Leishmania major telomerase TERT protein has a nuclear/mitochondrial eclipsed distribution that is affected by oxidative stress.

Authors:  Riward Campelo; Isabel Díaz Lozano; Katherine Figarella; Antonio Osuna; José Luis Ramírez
Journal:  Infect Immun       Date:  2014-10-13       Impact factor: 3.441

Review 8.  Telomere maintenance, function and evolution: the yeast paradigm.

Authors:  M T Teixeira; E Gilson
Journal:  Chromosome Res       Date:  2005       Impact factor: 5.239

9.  A novel class of developmentally regulated noncoding RNAs in Leishmania.

Authors:  Carole Dumas; Conan Chow; Michaela Müller; Barbara Papadopoulou
Journal:  Eukaryot Cell       Date:  2006-10-27

10.  The structure and repertoire of small interfering RNAs in Leishmania (Viannia) braziliensis reveal diversification in the trypanosomatid RNAi pathway.

Authors:  Vanessa D Atayde; Huafang Shi; Joseph B Franklin; Nicholas Carriero; Timothy Notton; Lon-Fye Lye; Katherine Owens; Stephen M Beverley; Christian Tschudi; Elisabetta Ullu
Journal:  Mol Microbiol       Date:  2012-12-26       Impact factor: 3.501

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