Literature DB >> 9546220

Crystal structure of aspartate decarboxylase at 2.2 A resolution provides evidence for an ester in protein self-processing.

A Albert1, V Dhanaraj, U Genschel, G Khan, M K Ramjee, R Pulido, B L Sibanda, F von Delft, M Witty, T L Blundell, A G Smith, C Abell.   

Abstract

The structure of L-aspartate-alpha-decarboxylase from E. coli has been determined at 2.2 A resolution. The enzyme is a tetramer with pseudofour-fold rotational symmetry. The subunits are six-stranded beta-barrels capped by small alpha-helices at each end. The active sites are located between adjacent subunits. The electron density provides evidence for catalytic pyruvoyl groups at three active sites and an ester at the fourth. The ester is an intermediate in the autocatalytic self-processing leading to formation of the pyruvoyl group. This unprecedented structure provides novel insights into the general phenomenon of protein processing.

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Year:  1998        PMID: 9546220     DOI: 10.1038/nsb0498-289

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  24 in total

1.  Structure of Escherichia coli aspartate α-decarboxylase Asn72Ala: probing the role of Asn72 in pyruvoyl cofactor formation.

Authors:  Michael E Webb; Carina M C Lobley; Fatima Soliman; Mairi L Kilkenny; Alison G Smith; Tom L Blundell; Chris Abell
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-03-28

Review 2.  Structural biology of S-adenosylmethionine decarboxylase.

Authors:  Shridhar Bale; Steven E Ealick
Journal:  Amino Acids       Date:  2009-12-08       Impact factor: 3.520

Review 3.  Protein-Derived Cofactors Revisited: Empowering Amino Acid Residues with New Functions.

Authors:  Victor L Davidson
Journal:  Biochemistry       Date:  2018-03-06       Impact factor: 3.162

4.  Pantothenic acid biosynthesis in the parasite Toxoplasma gondii: a target for chemotherapy.

Authors:  Sarmad N Mageed; Fraser Cunningham; Alvin Wei Hung; Hernani Leonardo Silvestre; Shijun Wen; Tom L Blundell; Chris Abell; Glenn A McConkey
Journal:  Antimicrob Agents Chemother       Date:  2014-07-21       Impact factor: 5.191

5.  Expression of the Corynebacterium glutamicum panD gene encoding L-aspartate-alpha-decarboxylase leads to pantothenate overproduction in Escherichia coli.

Authors:  N Dusch; A Pühler; J Kalinowski
Journal:  Appl Environ Microbiol       Date:  1999-04       Impact factor: 4.792

6.  S-Adenosylmethionine decarboxylase from the archaeon Methanococcus jannaschii: identification of a novel family of pyruvoyl enzymes.

Authors:  A D Kim; D E Graham; S H Seeholzer; G D Markham
Journal:  J Bacteriol       Date:  2000-12       Impact factor: 3.490

7.  Transplastomic expression of bacterial L-aspartate-alpha-decarboxylase enhances photosynthesis and biomass production in response to high temperature stress.

Authors:  W M Fouad; F Altpeter
Journal:  Transgenic Res       Date:  2009-04-08       Impact factor: 2.788

8.  Structural constraints on protein self-processing in L-aspartate-alpha-decarboxylase.

Authors:  Florian Schmitzberger; Mairi L Kilkenny; Carina M C Lobley; Michael E Webb; Mladen Vinkovic; Dijana Matak-Vinkovic; Michael Witty; Dimitri Y Chirgadze; Alison G Smith; Chris Abell; Tom L Blundell
Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

9.  Pyrazinoic Acid Inhibits Mycobacterial Coenzyme A Biosynthesis by Binding to Aspartate Decarboxylase PanD.

Authors:  Pooja Gopal; Wilson Nartey; Priya Ragunathan; Jansy Sarathy; Firat Kaya; Michelle Yee; Claudia Setzer; Malathy Sony Subramanian Manimekalai; Véronique Dartois; Gerhard Grüber; Thomas Dick
Journal:  ACS Infect Dis       Date:  2017-10-18       Impact factor: 5.084

10.  Expression of bacterial L-aspartate-alpha-decarboxylase in tobacco increases beta-alanine and pantothenate levels and improves thermotolerance.

Authors:  Walid M Fouad; Bala Rathinasabapathi
Journal:  Plant Mol Biol       Date:  2006-03       Impact factor: 4.076

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