Literature DB >> 9544937

Development of an improved cloning vector and transformation system in Amycolatopsis mediterranei (Nocardia mediterranei).

R Lal1, R Khanna, N Dhingra, M Khanna, S Lal.   

Abstract

A versatile plasmid cloning vector pRL60 carrying kanamycin/neomycin resistance (km/neo), erythromycin resistance (ermE) and alpha-amylase (alpha-amy) marker genes that replicates in various Amycolatopsis mediterranei strains and Escherichia coli has been constructed. This cloning vector has been derived from a hybrid plasmid pRL50, which was developed by cloning ermE from pIJ4026 into a pRL1 derivative pULAM2. While cloning ermE into the BamHI site of pULAM2, only a hybrid plasmid pRL50 with an additional copy of pULAM2 was selected. Thus pRL50 (18.7 kb) contained two copies each of the km/neo, alpha-amy, and one copy of ermE. When pRL50 was transformed into A. mediterranei DSM 40773 through electroporation and selected under erythromycin resistance, the plasmid underwent a spontaneous deletion of 8.5 kb fragment resulting in the formation of plasmid pRL60. pRL60 (10.2 kb) is a shuttle vector between A. mediterranei and E. coli with three marker genes: km/neo, ermE and alpha-amy. ermE is expressed in A. mediterranei thus allowing good selection of transformants. The alpha-amy gene of pRL60 is also expressed in A. mediterranei DSM 40773 and its activity can be easily detected on starch containing medium after iodine staining. Most critical parameters evaluated for electrotransformation using pRL60 in A. mediterranei were growth phase, electrical field strength, pulse length, pretreatment of mycelia with lysozyme and use of salt free water. At optimized parameters, a transformation efficiency of 4.0 x 10(4) transformants/microg DNA was reproducibly achieved for A. mediterranei DSM 40773. pRL60 could also be transformed into A. mediterranei DSM 43304, DSM 46095, MTCC-17 and in mutants F1/24 and T-195, (derived from an industrial strain of A. mediterranei N813). The alpha-amy of pRL60 conferred an amylolytic phenotype to all these strains. With the development of pRL60 and a reproducible transformation protocol, the application of recombinant DNA techniques to these industrial microorganisms has now become feasible.

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Year:  1998        PMID: 9544937     DOI: 10.7164/antibiotics.51.161

Source DB:  PubMed          Journal:  J Antibiot (Tokyo)        ISSN: 0021-8820            Impact factor:   2.649


  9 in total

1.  Development of cloning vectors and transformation methods for Amycolatopsis.

Authors:  Gauri Dhingra; Rekha Kumari; Shashi Bala; Swati Majumdar; Shweta Malhotra; Poonam Sharma; Sukanya Lal; John Cullum; Rup Lal
Journal:  J Ind Microbiol Biotechnol       Date:  2003-04-08       Impact factor: 3.346

2.  Modification of rifamycin polyketide backbone leads to improved drug activity against rifampicin-resistant Mycobacterium tuberculosis.

Authors:  Aeshna Nigam; Khaled H Almabruk; Anjali Saxena; Jongtae Yang; Udita Mukherjee; Hardeep Kaur; Puneet Kohli; Rashmi Kumari; Priya Singh; Lev N Zakharov; Yogendra Singh; Taifo Mahmud; Rup Lal
Journal:  J Biol Chem       Date:  2014-07-25       Impact factor: 5.157

3.  Development of an Improved System for the Generation of Knockout Mutants of Amycolatopsis sp. Strain ATCC 39116.

Authors:  Florian Meyer; Hilke Pupkes; Alexander Steinbüchel
Journal:  Appl Environ Microbiol       Date:  2017-01-17       Impact factor: 4.792

Review 4.  Synthetic Biology in Action: Developing a Drug Against MDR-TB.

Authors:  Anjali Saxena; Udita Mukherjee; Rashmi Kumari; Priya Singh; Rup Lal
Journal:  Indian J Microbiol       Date:  2014-09-30       Impact factor: 2.461

5.  The genus Amycolatopsis: Indigenous plasmids, cloning vectors and gene transfer systems.

Authors:  S Malhotra; R Lal
Journal:  Indian J Microbiol       Date:  2007-06-14       Impact factor: 2.461

Review 6.  Bedaquiline: Fallible Hope Against Drug Resistant Tuberculosis.

Authors:  Priya Singh; Rashmi Kumari; Rup Lal
Journal:  Indian J Microbiol       Date:  2017-10-24       Impact factor: 2.461

7.  Draft Genome Sequence of Rifamycin Derivatives Producing Amycolatopsis mediterranei Strain DSM 46096/S955.

Authors:  Priya Singh; Rashmi Kumari; Udita Mukherjee; Anjali Saxena; Utkarsh Sood; Rup Lal
Journal:  Genome Announc       Date:  2014-08-14

8.  Marker-Free Genome Engineering in Amycolatopsis Using the pSAM2 Site-Specific Recombination System.

Authors:  Luísa D F Santos; Laëtitia Caraty-Philippe; Emmanuelle Darbon; Jean-Luc Pernodet
Journal:  Microorganisms       Date:  2022-04-16

9.  Draft Genome Sequence of Amycolatopsis mediterranei DSM 40773, a Tangible Antibiotic Producer.

Authors:  Udita Mukherjee; Anjali Saxena; Rashmi Kumari; Priya Singh; Rup Lal
Journal:  Genome Announc       Date:  2014-07-31
  9 in total

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