Literature DB >> 9541545

Frequent gene conversion between human red and green opsin genes.

Z Zhao, D Hewett-Emmett, W H Li.   

Abstract

To study the evolution of human X-linked red and green opsin genes, genomic sequences in large regions of the two genes were compared. The divergences in introns 3, 4, and 5 and the 3' flanking sequence of the two genes are significantly lower than those in exons 4 and 5. The homogenization mechanism of introns and the 3' flanking sequence of human red and green opsin genes is probably gene conversion, which also occurred in exons 1 and 6. At least one gene conversion event occurred in each of three regions (1, 3, and 5) in the sequences compared. In conclusion, gene conversion has occurred frequently between human red and green opsin genes, but exons 2, 3, 4, and 5 have been maintained distinct between the two genes by natural selection.

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Year:  1998        PMID: 9541545     DOI: 10.1007/pl00013147

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  14 in total

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Authors:  M Neitz; J Neitz; G H Jacobs
Journal:  Science       Date:  1991-05-17       Impact factor: 47.728

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Journal:  Proc Natl Acad Sci U S A       Date:  1989-02       Impact factor: 11.205

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Authors:  D Vollrath; J Nathans; R W Davis
Journal:  Science       Date:  1988-06-17       Impact factor: 47.728

4.  Unbiased estimation of the rates of synonymous and nonsynonymous substitution.

Authors:  W H Li
Journal:  J Mol Evol       Date:  1993-01       Impact factor: 2.395

5.  Haplotype diversity in the human red and green opsin genes: evidence for frequent sequence exchange in exon 3.

Authors:  J Winderickx; L Battisti; Y Hibiya; A G Motulsky; S S Deeb
Journal:  Hum Mol Genet       Date:  1993-09       Impact factor: 6.150

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Authors:  S L Merbs; J Nathans
Journal:  Nature       Date:  1992-04-02       Impact factor: 49.962

7.  Gene conversion and natural selection in the evolution of X-linked color vision genes in higher primates.

Authors:  Y H Zhou; W H Li
Journal:  Mol Biol Evol       Date:  1996-07       Impact factor: 16.240

8.  Molecular determinants of human red/green color discrimination.

Authors:  A B Asenjo; J Rim; D D Oprian
Journal:  Neuron       Date:  1994-05       Impact factor: 17.173

9.  Molecular genetics of human color vision: the genes encoding blue, green, and red pigments.

Authors:  J Nathans; D Thomas; D S Hogness
Journal:  Science       Date:  1986-04-11       Impact factor: 47.728

10.  Intronic gene conversion in the evolution of human X-linked color vision genes.

Authors:  S K Shyue; L Li; B H Chang; W H Li
Journal:  Mol Biol Evol       Date:  1994-05       Impact factor: 16.240

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  14 in total

1.  Color vision: opsins and options.

Authors:  J D Mollon
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

2.  Differential expression of duplicated opsin genes in two eyetypes of ostracod crustaceans.

Authors:  Todd H Oakley; Daniel R Huber
Journal:  J Mol Evol       Date:  2004-08       Impact factor: 2.395

Review 3.  Population genetic models of duplicated genes.

Authors:  Hideki Innan
Journal:  Genetica       Date:  2009-03-06       Impact factor: 1.082

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Authors:  Andrey A Perelygin; Andrey A Zharkikh; Svetlana V Scherbik; Margo A Brinton
Journal:  J Mol Evol       Date:  2006-10-05       Impact factor: 2.395

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Authors:  Daniel Escobar-Camacho; Erica Ramos; Cesar Martins; Karen L Carleton
Journal:  Mol Ecol       Date:  2017-01-27       Impact factor: 6.185

6.  Ectopic gene conversions in the genome of ten hemiascomycete yeast species.

Authors:  Robert T Morris; Guy Drouin
Journal:  Int J Evol Biol       Date:  2010-11-25

7.  Gene conversion and purifying selection shape nucleotide variation in gibbon L/M opsin genes.

Authors:  Tomohide Hiwatashi; Akichika Mikami; Takafumi Katsumura; Bambang Suryobroto; Dyah Perwitasari-Farajallah; Suchinda Malaivijitnond; Boripat Siriaroonrat; Hiroki Oota; Shunji Goto; Shoji Kawamura
Journal:  BMC Evol Biol       Date:  2011-10-22       Impact factor: 3.260

8.  Gene conversion and positive selection driving the evolution of the Caenorhabditis ssp. ZIM/HIM-8 protein family.

Authors:  Qingpo Liu
Journal:  J Mol Evol       Date:  2009-02-17       Impact factor: 2.395

9.  Evolution and functional characterisation of melanopsins in a deep-sea chimaera (elephant shark, Callorhinchus milii).

Authors:  Wayne I L Davies; Boon-Hui Tay; Lei Zheng; Janine A Danks; Sydney Brenner; Russell G Foster; Shaun P Collin; Mark W Hankins; Byrappa Venkatesh; David M Hunt
Journal:  PLoS One       Date:  2012-12-14       Impact factor: 3.240

10.  Complex patterns of divergence among green-sensitive (RH2a) African cichlid opsins revealed by Clade model analyses.

Authors:  Cameron J Weadick; Belinda S W Chang
Journal:  BMC Evol Biol       Date:  2012-10-18       Impact factor: 3.260

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