Literature DB >> 9524933

SERF: a program for accessible surface area calculations.

D R Flower1.   

Abstract

The program SERF has been designed to facilitate the greater use of accessible surface area calculations in the analysis of protein structure, including analysis of surface area changes on binding and complexation. For comparative purposes, the program implements a number of alternative methods for calculating surface areas, including those that approximate residues by single spheres. Algorithmic details, comparative performance, and the software implementation of SERF are discussed.

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Year:  1997        PMID： 9524933     DOI： 10.1016/s1093-3263(97)00082-x

Source DB:  PubMed          Journal:  J Mol Graph Model        ISSN： 1093-3263            Impact factor:   2.518


  5 in total

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2.  Designability of alpha-helical proteins.

Authors:  Eldon G Emberly; Ned S Wingreen; Chao Tang
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-12       Impact factor: 11.205

3.  Coupled motions between pore and voltage-sensor domains: a model for Shaker B, a voltage-gated potassium channel.

Authors:  Werner Treptow; Bernard Maigret; Christophe Chipot; Mounir Tarek
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

4.  Solvent accessible surface area approximations for rapid and accurate protein structure prediction.

Authors:  Elizabeth Durham; Brent Dorr; Nils Woetzel; René Staritzbichler; Jens Meiler
Journal:  J Mol Model       Date:  2009-02-21       Impact factor: 1.810

5.  Analysis of accessible surface of residues in proteins.

Authors:  Laurence Lins; Annick Thomas; Robert Brasseur
Journal:  Protein Sci       Date:  2003-07       Impact factor: 6.725
  5 in total

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