Literature DB >> 9506988

Adenylation of small RNAs in human cells. Development of a cell-free system for accurate adenylation on the 3'-end of human signal recognition particle RNA.

K M Sinha1, J Gu, Y Chen, R Reddy.   

Abstract

The 3'-end sequences of several human small RNAs were determined, and the results show that a fraction of human cytoplasmic 7SL, ribosomal 5S, and nuclear U2, U6, and 7SK small RNAs contain a post-transcriptionally added adenylic acid residue on their 3'-ends. Incubation of HeLa cell extract in vitro in the presence of [alpha-32P]ATP resulted in labeling of several small RNAs including ribosomal 5S and cytoplasmic 7SL as well as U2 and U6 small nuclear RNAs. Analysis of 7SL RNA labeled in this in vitro adenylation system showed that a single adenylic acid residue is added to the 3'-end. These results show that the adenylation observed in the in vitro system reflects the post-transcriptional adenylation occurring in vivo.

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Year:  1998        PMID: 9506988     DOI: 10.1074/jbc.273.12.6853

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  21 in total

1.  Evolutionary conservation of post-transcriptional 3' end adenylation of small RNAs: S. cerevisiae signal recognition particle RNA and U2 small nuclear RNA are post-transcriptionally adenylated.

Authors:  K Perumal; J Gu; R Reddy
Journal:  Mol Cell Biochem       Date:  2000-05       Impact factor: 3.396

Review 2.  The 3' end formation in small RNAs.

Authors:  Karthika Perumal; Ram Reddy
Journal:  Gene Expr       Date:  2002

3.  Effect of 3' terminal adenylic acid residue on the uridylation of human small RNAs in vitro and in frog oocytes.

Authors:  Y Chen; K Sinha; K Perumal; R Reddy
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

4.  Synthesis and processing of tRNA-related SINE transcripts in Arabidopsis thaliana.

Authors:  Thierry Pélissier; Cécile Bousquet-Antonelli; Laurence Lavie; Jean-Marc Deragon
Journal:  Nucleic Acids Res       Date:  2004-07-28       Impact factor: 16.971

5.  Polyadenylation of stable RNA precursors in vivo.

Authors:  Z Li; S Pandit; M P Deutscher
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

6.  Localization of signal recognition particle RNA in the nucleolus of mammalian cells.

Authors:  M R Jacobson; T Pederson
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

7.  Widespread RNA 3'-end oligouridylation in mammals.

Authors:  Yun S Choi; Weronika Patena; Andrew D Leavitt; Michael T McManus
Journal:  RNA       Date:  2012-01-30       Impact factor: 4.942

8.  Identification of a approximately 30S size non-ribosomal Saccharomyces cerevisiae RNA that is rapidly labeled on its 3' end by ATP or UTP.

Authors:  K Sinha; R Reddy
Journal:  Mol Biol Rep       Date:  2000-09       Impact factor: 2.316

9.  Genome-wide characterization of methylguanosine-capped and polyadenylated small RNAs in the rice blast fungus Magnaporthe oryzae.

Authors:  Malali Gowda; Cristiano C Nunes; Joshua Sailsbery; Minfeng Xue; Feng Chen; Cassie A Nelson; Douglas E Brown; Yeonyee Oh; Shaowu Meng; Thomas Mitchell; Curt H Hagedorn; Ralph A Dean
Journal:  Nucleic Acids Res       Date:  2010-07-21       Impact factor: 16.971

10.  Adenylation of plant miRNAs.

Authors:  Shanfa Lu; Ying-Hsuan Sun; Vincent L Chiang
Journal:  Nucleic Acids Res       Date:  2009-02-02       Impact factor: 16.971

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