Literature DB >> 9503016

The pufferfish SLP-1 gene, a new member of the SCL/TAL-1 family of transcription factors.

B Göttgens1, J G Gilbert, L M Barton, S Aparicio, K Hawker, S Mistry, M Vaudin, A King, D Bentley, G Elgar, A R Green.   

Abstract

The SCL/TAL-1 gene encodes a basic helix-loop-helix (bHLH) transcription factor essential for the development of all hemopoietic lineages and also acts as a T-cell oncogene. Four related genes have been described in mammals (LYL-1, TAL-2, NSCL1, and NSCL2), all of which exhibit a high degree of sequence similarity to SCL/TAL-1 in the bHLH domain and two of which (LYL-1 and TAL-2) have also been implicated in the pathogenesis of T-cell acute lymphoblastic leukemia. In this study we describe the identification and characterization of a pufferfish gene termed SLP-1, which represents a new member of this gene family. The genomic structure and sequence of SLP-1 suggests that it forms a subfamily with SCL/TAL-1 and LYL-1 and is most closely related to SCL/TAL-1. However, unlike SCL/TAL-1, SLP-1 is widely expressed. Sequence analysis of a whole cosmid containing SLP-1 shows that SLP-1 is flanked upstream by a zinc finger gene and a fork-head-domain gene and downstream by a heme-oxygenase and a RING finger gene.

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Year:  1998        PMID: 9503016     DOI: 10.1006/geno.1997.5162

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  4 in total

1.  Long-range comparison of human and mouse SCL loci: localized regions of sensitivity to restriction endonucleases correspond precisely with peaks of conserved noncoding sequences.

Authors:  B Göttgens; J G Gilbert; L M Barton; D Grafham; J Rogers; D R Bentley; A R Green
Journal:  Genome Res       Date:  2001-01       Impact factor: 9.043

2.  Late changes in spliceosomal introns define clades in vertebrate evolution.

Authors:  B Venkatesh; Y Ning; S Brenner
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

3.  Transcriptional regulation of the stem cell leukemia gene (SCL)--comparative analysis of five vertebrate SCL loci.

Authors:  Berthold Göttgens; Linda M Barton; Michael A Chapman; Angus M Sinclair; Bjarne Knudsen; Darren Grafham; James G R Gilbert; Jane Rogers; David R Bentley; Anthony R Green
Journal:  Genome Res       Date:  2002-05       Impact factor: 9.043

4.  Regulation of the stem cell leukemia (SCL) gene: a tale of two fishes.

Authors:  L M Barton; B Gottgens; M Gering; J G Gilbert; D Grafham; J Rogers; D Bentley; R Patient; A R Green
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-29       Impact factor: 11.205

  4 in total

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