Literature DB >> 9498107

A comparative genetic map of rat, mouse and human genomes.

T Serikawa1, Z Cui, N Yokoi, T Kuramoto, Y Kondo, K Kitada, J L Guénet.   

Abstract

The increasing availability of molecular markers and the development of highly efficient gene mapping strategies for the mouse, rat and human genomes have generated vast quantities of information allowing for the progressive refinement of comparative maps. In this publication we report on an updated version of our rat/mouse/human comparative genetic map, based on the mouse map. Databases for mouse, rat and human gene mapping were used for the collection of homologs mapped in the species. The comparative map was constructed with a total of 1,235 mouse loci having known homologs in the rat and/or human: 16 having homologs only in the rat, 884 having only in the human and 335 both in the rat and human. The combined length of the segments conserved between the rat and mouse spans 758 cM on the mouse map. This indicates that about 47% of the mouse genome is now covered by known rat homologous regions. Five novel regions homologous for the rat and mouse were identified. This comparative genetic map should be useful for researchers working on genetic studies in the rat, mouse and human.

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Year:  1998        PMID: 9498107     DOI: 10.1538/expanim.47.1

Source DB:  PubMed          Journal:  Exp Anim        ISSN: 0007-5124


  8 in total

1.  Integrative genomics: in silico coupling of rat physiology and complex traits with mouse and human data.

Authors:  Simon N Twigger; Jeff Nie; Victor Ruotti; Jiaming Yu; Dan Chen; Dawei Li; Jed Mathis; Vijay Narayanasamy; Gopal R Gopinath; Dean Pasko; Mary Shimoyama; Norberto De La Cruz; Susan Bromberg; Anne E Kwitek; Howard J Jacob; Peter J Tonellato
Journal:  Genome Res       Date:  2004-04       Impact factor: 9.043

2.  Blood pressure and heart rate QTL in mice of the B6/D2 lineage: sex differences and environmental influences.

Authors:  David A Blizard; Arimantas Lionikas; David J Vandenbergh; Terrie Vasilopoulos; Glenn S Gerhard; James W Griffith; Laura C Klein; Joseph T Stout; Holly A Mack; Joan M Lakoski; Lars Larsson; Jeanne M Spicer; George P Vogler; Gerald E McClearn
Journal:  Physiol Genomics       Date:  2008-12-09       Impact factor: 3.107

3.  Correlation between genetic and cytogenetic maps of the rat.

Authors:  Y Andoh; T Kuramoto; N Yokoi; T Maihara; K Kitada; T Serikawa
Journal:  Mamm Genome       Date:  1998-04       Impact factor: 2.957

4.  Attractin/mahogany/zitter plays a critical role in myelination of the central nervous system.

Authors:  T Kuramoto; K Kitada; T Inui; Y Sasaki; K Ito; T Hase; S Kawagachi; Y Ogawa; K Nakao; G S Barsh; M Nagao; T Ushijima; T Serikawa
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-16       Impact factor: 11.205

Review 5.  Strategy for uncovering complex determinants of hypertension using animal models.

Authors:  G T Cicila
Journal:  Curr Hypertens Rep       Date:  2000-04       Impact factor: 5.369

6.  Establishment of thymoma-prone congenic rat strain, ACI.BUF/Mna-Tsr1/Tsr1.

Authors:  Mutsushi Matsuyama; Kazuo Kato; Kyoko Higo-Moriguchi; Tetsuji Yamada; Takashi Kuramoto; Makoto Kuroda
Journal:  J Cancer Res Clin Oncol       Date:  2008-01-22       Impact factor: 4.553

7.  Five quantitative trait loci affecting 4-nitroquinoline 1-oxide-induced tongue cancer in the rat.

Authors:  J I Tanuma; K Fujii; M Hirano; H Matsuuchi; H Shisa; H Hiai; M Kitano
Journal:  Jpn J Cancer Res       Date:  2001-06

8.  A second generation genetic map for rainbow trout (Oncorhynchus mykiss).

Authors:  Caird E Rexroad; Yniv Palti; Scott A Gahr; Roger L Vallejo
Journal:  BMC Genet       Date:  2008-11-19       Impact factor: 2.797

  8 in total

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