Literature DB >> 9492273

Purification, characterisation and reaction mechanism of monofunctional 2-hydroxypentadienoic acid hydratase from Escherichia coli.

J R Pollard1, T D Bugg.   

Abstract

2-Hydroxypentadienoic acid hydratase is found on many bacterial catabolic pathways responsible for the degradation of aromatic compounds. Monofunctional 2-hydroxypentadienoic acid hydratase from Escherichia coli has been purified 3800-fold to homogeneity, using enzymatically generated 2-hydroxypentadienoic acid as substrate. The purified 28-kDa protein requires a divalent metal ion for activity, optimum activity being obtained with Mn2+. Steady-state kinetic parameters were measured (Km = 41 +/- 4 microM, k(cat) = 450 s(-1)), the enzyme exhibiting substrate inhibition at high substrate concentrations. The pH/rate profile and inhibition by group-specific reagents were examined, and evidence was obtained for essential cysteine and tryptophan residues. An amino acid sequence alignment of the inferred amino acid sequence with nine other sequences was carried out and revealed several conserved sequence motifs. The substrate for the enzymatic reaction was found to be the dienol tautomer of 2-hydroxypentadienoic acid. Analysis of the reaction products by HPLC confirmed the identity of the 4-hydroxy-2-ketopentanoic acid product. Analogues of possible reaction intermediates were tested as inhibitors, and sodium oxalate was found to act as a potent enzyme inhibitor (Ki = 4.9 +/- 0.7 microM). The potent inhibition by oxalate is consistent with a mechanism in which tautomerisation to 2-ketopent-3-enoic acid takes place at the active site, followed by conjugate addition of water.

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Year:  1998        PMID: 9492273     DOI: 10.1046/j.1432-1327.1998.2510098.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  12 in total

1.  Substrate selectivity and biochemical properties of 4-hydroxy-2-keto-pentanoic acid aldolase from Escherichia coli.

Authors:  J R Pollard; D Rialland; T D Bugg
Journal:  Appl Environ Microbiol       Date:  1998-10       Impact factor: 4.792

Review 2.  Biodegradation of aromatic compounds by Escherichia coli.

Authors:  E Díaz; A Ferrández; M A Prieto; J L García
Journal:  Microbiol Mol Biol Rev       Date:  2001-12       Impact factor: 11.056

3.  Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10.

Authors:  H Nojiri; H Sekiguchi; K Maeda; M Urata; S Nakai; T Yoshida; H Habe; T Omori
Journal:  J Bacteriol       Date:  2001-06       Impact factor: 3.490

4.  Structural and Kinetic Characterization of the 4-Carboxy-2-hydroxymuconate Hydratase from the Gallate and Protocatechuate 4,5-Cleavage Pathways of Pseudomonas putida KT2440.

Authors:  Scott Mazurkewich; Ashley S Brott; Matthew S Kimber; Stephen Y K Seah
Journal:  J Biol Chem       Date:  2016-02-11       Impact factor: 5.157

5.  Identification of FAH domain-containing protein 1 (FAHD1) as oxaloacetate decarboxylase.

Authors:  Haymo Pircher; Susanne von Grafenstein; Thomas Diener; Christina Metzger; Eva Albertini; Andrea Taferner; Hermann Unterluggauer; Christian Kramer; Klaus R Liedl; Pidder Jansen-Dürr
Journal:  J Biol Chem       Date:  2015-01-09       Impact factor: 5.157

6.  Identification of a hydratase and a class II aldolase involved in biodegradation of the organic solvent tetralin.

Authors:  M J Hernáez; B Floriano; J J Ríos; E Santero
Journal:  Appl Environ Microbiol       Date:  2002-10       Impact factor: 4.792

7.  Stereochemical Consequences of Vinylpyruvate Hydratase-Catalyzed Reactions.

Authors:  William H Johnson; Tyler M M Stack; Stephanie M Taylor; Elizabeth A Burks; Christian P Whitman
Journal:  Biochemistry       Date:  2016-07-12       Impact factor: 3.162

8.  2-Hydroxypenta-2,4-dienoate metabolic pathway genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1.

Authors:  Masayuki Sakai; Keisuke Miyauchi; Noboru Kato; Eiji Masai; Masao Fukuda
Journal:  Appl Environ Microbiol       Date:  2003-01       Impact factor: 4.792

9.  Identification of human fumarylacetoacetate hydrolase domain-containing protein 1 (FAHD1) as a novel mitochondrial acylpyruvase.

Authors:  Haymo Pircher; Grit D Straganz; Daniela Ehehalt; Geneviève Morrow; Robert M Tanguay; Pidder Jansen-Dürr
Journal:  J Biol Chem       Date:  2011-08-30       Impact factor: 5.157

10.  Expression, purification and crystallization of 2-oxo-hept-4-ene-1,7-dioate hydratase (HpcG) from Escherichia coli C.

Authors:  Tomoko Adachi; Atsushi Izumi; Dean Rea; Sam Yong Park; Jeremy R H Tame; David I Roper
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-09-30
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