Literature DB >> 9466695

Differences and similarities between various tandem repeat sequences: minisatellites and microsatellites.

H Debrauwere1, C G Gendrel, S Lechat, M Dutreix.   

Abstract

Tandemly repetitive DNA sequences are abundantly interspersed in the genome of practically all eukaryotic species studied. The relative occurrence of one type of repetitive sequence and its location in the genome appear to be species specific. A common property of repetitive sequences within the living world is their ability to give rise to variants with increased or reduced number of repeats. This instability depends upon numerous parameters whose exact role is unclear: the number of repeats, their sequence content, their chromosomal location, the mismatch repair capability of the cell, the developmental stage of the cell (mitotic or meiotic) and/or the sex of the transmitting parent. It is now apparent that mutations in repetitive sequences are a common cause of human disease, including cancer and disorders which may exhibit a dominant mode of inheritance. Two mechanisms have been proposed to explain the instability of repetitive sequences: DNA polymerase slippage, which may account for the instability of short repeats and unequal recombination which reshuffles repeat variants and maintains repeat heterogeneity in minisatellites. The purpose of this review is to show that no general rule can explain the instability of repetitive sequence. Each sequence of repeats is under the influence of local and general biological activities that determine its level of instability.

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Year:  1997        PMID: 9466695     DOI: 10.1016/s0300-9084(97)82006-8

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  29 in total

1.  Frequent homologous recombination events between molecules of one RNA component in a multipartite RNA virus.

Authors:  A Bruyere; M Wantroba; S Flasinski; A Dzianott; J J Bujarski
Journal:  J Virol       Date:  2000-05       Impact factor: 5.103

2.  Control of GT repeat stability in Schizosaccharomyces pombe by mismatch repair factors.

Authors:  A A Mansour; C Tornier; E Lehmann; M Darmon; O Fleck
Journal:  Genetics       Date:  2001-05       Impact factor: 4.562

3.  Genetic diversity: frameshift mechanisms alter coding of a gene (Epstein-Barr virus LF3 gene) that contains multiple 102-base-pair direct sequence repeats.

Authors:  Shao-An Xue; M D Jones; Qi-Long Lu; J M Middeldorp; Beverly E Griffin
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

4.  A pilot study examining germline minisatellite mutations in the offspring of Danish childhood and adolescent cancer survivors treated with radiotherapy.

Authors:  Gwen S Rees; Michael Z Trikic; Jeanette F Winther; E Janet Tawn; Marilyn Stovall; Jørgen H Olsen; Catherine Rechnitzer; Henrik Schrøder; Per Guldberg; John D Boice
Journal:  Int J Radiat Biol       Date:  2006-03       Impact factor: 2.694

5.  Matrix attachment region (MAR) properties and abnormal expansion of AT island minisatellites in FRA16B fragile sites in leukemic CEM cells.

Authors:  Jennifer A Jackson; Alex V Trevino; Maryanne C Herzig; Terence S Herman; Jan M Woynarowski
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

6.  Frameshift mutagenesis and microsatellite instability induced by human alkyladenine DNA glycosylase.

Authors:  Joanna Klapacz; Gondichatnahalli M Lingaraju; Haiwei H Guo; Dharini Shah; Ayelet Moar-Shoshani; Lawrence A Loeb; Leona D Samson
Journal:  Mol Cell       Date:  2010-03-26       Impact factor: 17.970

7.  Numerical investigation of sequence dependence in homologous recognition: evidence for homology traps.

Authors:  Renaud Fulconis; Marie Dutreix; Jean-Louis Viovy
Journal:  Biophys J       Date:  2005-03-04       Impact factor: 4.033

Review 8.  Comparative genomics and molecular dynamics of DNA repeats in eukaryotes.

Authors:  Guy-Franck Richard; Alix Kerrest; Bernard Dujon
Journal:  Microbiol Mol Biol Rev       Date:  2008-12       Impact factor: 11.056

9.  Zinc regulates the stability of repetitive minisatellite DNA tracts during stationary phase.

Authors:  Maire K Kelly; Peter A Jauert; Linnea E Jensen; Christine L Chan; Chinh S Truong; David T Kirkpatrick
Journal:  Genetics       Date:  2007-12       Impact factor: 4.562

10.  Replication slippage versus point mutation rates in short tandem repeats of the human genome.

Authors:  Danilo Pumpernik; Borut Oblak; Branko Borstnik
Journal:  Mol Genet Genomics       Date:  2007-10-10       Impact factor: 3.291

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