Literature DB >> 9463389

Inosine exists in mRNA at tissue-specific levels and is most abundant in brain mRNA.

M S Paul1, B L Bass.   

Abstract

The general view that mRNA does not contain inosine has been challenged by the discovery of adenosine deaminases that act on RNA (ADARs). Although inosine monophosphate (IMP) cannot be detected in crude preparations of nucleotides derived from poly(A)+ RNA, here we show it is readily detectable and quantifiable once it is purified away from the Watson-Crick nucleotides. We report that IMP is present in mRNA at tissue-specific levels that correlate with the levels of ADAR mRNA expression. The amount of IMP present in poly(A)+ RNA isolated from various mammalian tissues suggests adenosine deamination may play an important role in regulating gene expression, particularly in brain, where we estimate one IMP is present for every 17 000 ribonucleotides.

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Year:  1998        PMID: 9463389      PMCID: PMC1170460          DOI: 10.1093/emboj/17.4.1120

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  28 in total

Review 1.  RNA editing.

Authors:  L Simpson; R B Emeson
Journal:  Annu Rev Neurosci       Date:  1996       Impact factor: 12.449

2.  RNA editing in Drosophila 4f-rnp gene nuclear transcripts by multiple A-to-G conversions.

Authors:  J P Petschek; M J Mermer; M R Scheckelhoff; A A Simone; J C Vaughn
Journal:  J Mol Biol       Date:  1996-06-28       Impact factor: 5.469

Review 3.  The role of RNA editing in controlling glutamate receptor channel properties.

Authors:  P H Seeburg
Journal:  J Neurochem       Date:  1996-01       Impact factor: 5.372

4.  Two naturally occurring alpha2,6-sialyltransferase forms with a single amino acid change in the catalytic domain differ in their catalytic activity and proteolytic processing.

Authors:  J Ma; R Qian; F M Rausa; K J Colley
Journal:  J Biol Chem       Date:  1997-01-03       Impact factor: 5.157

Review 5.  Enzymatic conversion of adenosine to inosine and to N1-methylinosine in transfer RNAs: a review.

Authors:  H Grosjean; S Auxilien; F Constantinesco; C Simon; Y Corda; H F Becker; D Foiret; A Morin; Y X Jin; M Fournier; J L Fourrey
Journal:  Biochimie       Date:  1996       Impact factor: 4.079

6.  Editing of glutamate receptor subunit B pre-mRNA in vitro by site-specific deamination of adenosine.

Authors:  J H Yang; P Sklar; R Axel; T Maniatis
Journal:  Nature       Date:  1995-03-02       Impact factor: 49.962

7.  Editing of alpha-amino-3-hydroxy-5-methylisoxazole-4-propionic acid receptor GluR-B pre-mRNA in vitro reveals site-selective adenosine to inosine conversion.

Authors:  T Melcher; S Maas; M Higuchi; W Keller; P H Seeburg
Journal:  J Biol Chem       Date:  1995-04-14       Impact factor: 5.157

8.  A mammalian RNA editing enzyme.

Authors:  T Melcher; S Maas; A Herb; R Sprengel; P H Seeburg; M Higuchi
Journal:  Nature       Date:  1996-02-01       Impact factor: 49.962

9.  RNA editing of hepatitis delta virus antigenome by dsRNA-adenosine deaminase.

Authors:  A G Polson; B L Bass; J L Casey
Journal:  Nature       Date:  1996-04-04       Impact factor: 49.962

10.  Cloning of cDNAs encoding mammalian double-stranded RNA-specific adenosine deaminase.

Authors:  M A O'Connell; S Krause; M Higuchi; J J Hsuan; N F Totty; A Jenny; W Keller
Journal:  Mol Cell Biol       Date:  1995-03       Impact factor: 4.272

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  118 in total

Review 1.  Imprinted expression of small nucleolar RNAs in brain: time for RNomics.

Authors:  W Filipowicz
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

2.  A phylogenetic analysis reveals an unusual sequence conservation within introns involved in RNA editing.

Authors:  P J Aruscavage; B L Bass
Journal:  RNA       Date:  2000-02       Impact factor: 4.942

3.  HUGE: a database for human large proteins identified in the Kazusa cDNA sequencing project.

Authors:  Reiko Kikuno; Takahiro Nagase; Mina Waki; Osamu Ohara
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

Review 4.  Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin.

Authors:  Michael P Terns; Rebecca M Terns
Journal:  Gene Expr       Date:  2002

Review 5.  RNA editing by adenosine deaminases that act on RNA.

Authors:  Brenda L Bass
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

6.  A third member of the RNA-specific adenosine deaminase gene family, ADAR3, contains both single- and double-stranded RNA binding domains.

Authors:  C X Chen; D S Cho; Q Wang; F Lai; K C Carter; K Nishikura
Journal:  RNA       Date:  2000-05       Impact factor: 4.942

7.  Widespread RNA editing of embedded alu elements in the human transcriptome.

Authors:  Dennis D Y Kim; Thomas T Y Kim; Thomas Walsh; Yoshifumi Kobayashi; Tara C Matise; Steven Buyske; Abram Gabriel
Journal:  Genome Res       Date:  2004-09       Impact factor: 9.043

8.  Pronounced instability of tandem IU base pairs in RNA.

Authors:  Martin J Serra; Patricia E Smolter; Eric Westhof
Journal:  Nucleic Acids Res       Date:  2004-03-22       Impact factor: 16.971

9.  Evidence that RNA editing modulates splice site selection in the 5-HT2C receptor gene.

Authors:  Rachel Flomen; Joanne Knight; Pak Sham; Robert Kerwin; Andrew Makoff
Journal:  Nucleic Acids Res       Date:  2004-04-15       Impact factor: 16.971

10.  Micro-processing events in mRNAs identified by DHPLC analysis.

Authors:  Angela Gallo; Emma Thomson; James Brindle; Mary A O'Connell; Liam P Keegan
Journal:  Nucleic Acids Res       Date:  2002-09-15       Impact factor: 16.971

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