Literature DB >> 9461488

Substrate-binding domains of glycanases from Streptomyces lividans: characterization of a new family of xylan-binding domains.

C Dupont1, M Roberge, F Shareck, R Morosoli, D Kluepfel.   

Abstract

The substrate-binding domains of six glycanases from Streptomyces lividans were investigated to determine their specificity towards cellulose and xylan. Based upon amino acid sequence similarities, four of the six domains could be assigned to existing cellulose-binding domain families. However, the binding domains of xylanase A and arabinofuranosidase B could not be classified in any of the known families and should therefore be classified as members of a new family. Evidence is also presented that this new family is one of true xylan-binding domains.

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Year:  1998        PMID: 9461488      PMCID: PMC1219105          DOI: 10.1042/bj3300041

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  23 in total

1.  Tissue sulfhydryl groups.

Authors:  G L ELLMAN
Journal:  Arch Biochem Biophys       Date:  1959-05       Impact factor: 4.013

2.  Characterization of two important histidine residues in the active site of xylanase A from Streptomyces lividans, a family 10 glycanase.

Authors:  M Roberge; F Shareck; R Morosoli; D Kluepfel; C Dupont
Journal:  Biochemistry       Date:  1997-06-24       Impact factor: 3.162

3.  Protein measurement with the Folin phenol reagent.

Authors:  O H LOWRY; N J ROSEBROUGH; A L FARR; R J RANDALL
Journal:  J Biol Chem       Date:  1951-11       Impact factor: 5.157

4.  Purification and characterization of an acetyl xylan esterase produced by Streptomyces lividans.

Authors:  C Dupont; N Daigneault; F Shareck; R Morosoli; D Kluepfel
Journal:  Biochem J       Date:  1996-11-01       Impact factor: 3.857

5.  Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.

Authors:  H Towbin; T Staehelin; J Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  1979-09       Impact factor: 11.205

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  New alpha-L-arabinofuranosidase produced by Streptomyces lividans: cloning and DNA sequence of the abfB gene and characterization of the enzyme.

Authors:  P Vincent; F Shareck; C Dupont; R Morosoli; D Kluepfel
Journal:  Biochem J       Date:  1997-03-15       Impact factor: 3.857

8.  A modular xylanase containing a novel non-catalytic xylan-specific binding domain.

Authors:  G W Black; G P Hazlewood; S J Millward-Sadler; J I Laurie; H J Gilbert
Journal:  Biochem J       Date:  1995-04-01       Impact factor: 3.857

9.  Purification and characterization of the CelB endoglucanase from Streptomyces lividans 66 and DNA sequence of the encoding gene.

Authors:  S Wittmann; F Shareck; D Kluepfel; R Morosoli
Journal:  Appl Environ Microbiol       Date:  1994-05       Impact factor: 4.792

10.  Crystal structure, at 2.6-A resolution, of the Streptomyces lividans xylanase A, a member of the F family of beta-1,4-D-glycanases.

Authors:  U Derewenda; L Swenson; R Green; Y Wei; R Morosoli; F Shareck; D Kluepfel; Z S Derewenda
Journal:  J Biol Chem       Date:  1994-08-19       Impact factor: 5.157

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  14 in total

1.  The thermostabilizing domain, XynA, of Caldibacillus cellulovorans xylanase is a xylan binding domain.

Authors:  A Sunna; M D Gibbs; P L Bergquist
Journal:  Biochem J       Date:  2000-03-15       Impact factor: 3.857

2.  Cloning, expression, and cell surface localization of Paenibacillus sp. strain W-61 xylanase 5, a multidomain xylanase.

Authors:  Yasuko Ito; Toshio Tomita; Narayan Roy; Akito Nakano; Noriko Sugawara-Tomita; Seiji Watanabe; Naoko Okai; Naoki Abe; Yoshiyuki Kamio
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

3.  An unusual choanoflagellate protein released by Hedgehog autocatalytic processing.

Authors:  Elizabeth A Snell; Nina M Brooke; William R Taylor; Didier Casane; Hervé Philippe; Peter W H Holland
Journal:  Proc Biol Sci       Date:  2006-02-22       Impact factor: 5.349

4.  The carbohydrate-binding module (CBM)-like sequence is crucial for rice CWA1/BC1 function in proper assembly of secondary cell wall materials.

Authors:  Kanna Sato; Sachiko Ito; Takeo Fujii; Ryu Suzuki; Sachi Takenouchi; Satoshi Nakaba; Ryo Funada; Yuzou Sano; Shinya Kajita; Hidemi Kitano; Yoshihiro Katayama
Journal:  Plant Signal Behav       Date:  2010-11-01

5.  Purification and characterization of two sugarcane bagasse-absorbable thermophilic xylanases from the mesophilic Cellulomonas flavigena.

Authors:  Alejandro Santiago-Hernández; Jesús Vega-Estrada; María del Carmen Montes-Horcasitas; María Eugenia Hidalgo-Lara
Journal:  J Ind Microbiol Biotechnol       Date:  2007-01-12       Impact factor: 3.346

6.  A novel mechanism of xylan binding by a lectin-like module from Streptomyces lividans xylanase 10A.

Authors:  A B Boraston; P Tomme; E A Amandoron; D G Kilburn
Journal:  Biochem J       Date:  2000-09-15       Impact factor: 3.857

7.  Enhancement of the thermostability and hydrolytic activity of xylanase by random gene shuffling.

Authors:  H Shibuya; S Kaneko; K Hayashi
Journal:  Biochem J       Date:  2000-07-15       Impact factor: 3.857

8.  An alpha-L-arabinofuranosidase from Trichoderma reesei containing a noncatalytic xylan-binding domain.

Authors:  M Nogawa; K Yatsui; A Tomioka; H Okada; Y Morikawa
Journal:  Appl Environ Microbiol       Date:  1999-09       Impact factor: 4.792

9.  Identification of novel beta-mannan- and beta-glucan-binding modules: evidence for a superfamily of carbohydrate-binding modules.

Authors:  A Sunna; M D Gibbs; P L Bergquist
Journal:  Biochem J       Date:  2001-06-15       Impact factor: 3.857

10.  The catalytic and lectin domains of UDP-GalNAc:polypeptide alpha-N-Acetylgalactosaminyltransferase function in concert to direct glycosylation site selection.

Authors:  Jayalakshmi Raman; Timothy A Fritz; Thomas A Gerken; Oliver Jamison; David Live; Mian Liu; Lawrence A Tabak
Journal:  J Biol Chem       Date:  2008-06-18       Impact factor: 5.157

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