Literature DB >> 9461075

Eukaryotic RNA polymerase subunit RPB8 is a new relative of the OB family.

S Krapp1, G Kelly, J Reischl, R O Weinzierl, S Matthews.   

Abstract

RNA polymerase II subunit RPB8 is an essential subunit that is highly conserved throughout eukaryotic evolution and is present in all three types of nuclear RNA polymerases. We report the first high resolution structural insight into eukaryotic RNA polymerase architecture with the solution structure of RPB8 from Saccharomyces cerevisiae. It consists of an eight stranded, antiparallel beta-barrel, four short helical regions and a large, unstructured omega-loop. The strands are connected in classic Greek-key fashion. The overall topology is unusual and contains a striking C2 rotational symmetry. Furthermore, it is most likely a novel associate of the oligonucleotide/oligosaccharide (OB) binding protein class.

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Year:  1998        PMID: 9461075     DOI: 10.1038/nsb0298-110

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  9 in total

1.  Crystal structure of RPB5, a universal eukaryotic RNA polymerase subunit and transcription factor interaction target.

Authors:  F Todone; R O Weinzierl; P Brick; S Onesti
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

2.  Localization of the yeast RNA polymerase I-specific subunits.

Authors:  Nicolas Bischler; Laurent Brino; Christophe Carles; Michel Riva; Herbert Tschochner; Véronique Mallouh; Patrick Schultz
Journal:  EMBO J       Date:  2002-08-01       Impact factor: 11.598

3.  Involvement of multiple subunit-subunit contacts in the assembly of RNA polymerase II.

Authors:  M Kimura; A Ishihama
Journal:  Nucleic Acids Res       Date:  2000-02-15       Impact factor: 16.971

4.  Partners of Rpb8p, a small subunit shared by yeast RNA polymerases I, II and III.

Authors:  J F Briand; F Navarro; P Rematier; C Boschiero; S Labarre; M Werner; G V Shpakovski; P Thuriaux
Journal:  Mol Cell Biol       Date:  2001-09       Impact factor: 4.272

5.  The exomer cargo adaptor features a flexible hinge domain.

Authors:  Brian C Richardson; J Christopher Fromme
Journal:  Structure       Date:  2013-02-07       Impact factor: 5.006

6.  The cutting edge of archaeal transcription.

Authors:  Thomas Fouqueau; Fabian Blombach; Gwenny Cackett; Alice E Carty; Dorota M Matelska; Sapir Ofer; Simona Pilotto; Duy Khanh Phung; Finn Werner
Journal:  Emerg Top Life Sci       Date:  2018-12-14

7.  A segment of cold shock protein directs the folding of a combinatorial protein.

Authors:  Stephanie de Bono; Lutz Riechmann; Eric Girard; Roger L Williams; Greg Winter
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-25       Impact factor: 11.205

8.  Orthologs of the small RPB8 subunit of the eukaryotic RNA polymerases are conserved in hyperthermophilic Crenarchaeota and "Korarchaeota".

Authors:  Eugene V Koonin; Kira S Makarova; James G Elkins
Journal:  Biol Direct       Date:  2007-12-14       Impact factor: 4.540

9.  Structure of Rhodococcus equi virulence-associated protein B (VapB) reveals an eight-stranded antiparallel β-barrel consisting of two Greek-key motifs.

Authors:  Christina Geerds; Jens Wohlmann; Albert Haas; Hartmut H Niemann
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-06-18       Impact factor: 1.056

  9 in total

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