Literature DB >> 9441848

The search for origins of DNA replication.

M L DePamphilis1.   

Abstract

The past decade has witnessed an explosion of new information about the nature of DNA replication in eukaryotic cells. Much of this information has resulted from the advent of novel methods for identifying and characterizing origins of DNA replication in the genomes of viruses, plasmids, and cells. These methods can map with remarkable precision sites where replication begins. In addition, they provide assays for origin activity that can be used to identify the sequence of events leading to the formation and activation of prereplication complexes at specific sites in chromosomal DNA. I summarize briefly the current view of eukaryotic replication origins and the methods that have been used to identify and characterize them. Selected methods that show promise for future applications are then described in detail in subsequent articles.

Mesh:

Year:  1997        PMID: 9441848     DOI: 10.1006/meth.1997.0521

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  11 in total

1.  Replication initiation patterns in the beta-globin loci of totipotent and differentiated murine cells: evidence for multiple initiation regions.

Authors:  Mirit I Aladjem; Luo Wei Rodewald; Chii Mai Lin; Sarah Bowman; Daniel M Cimbora; Linnea L Brody; Elliot M Epner; Mark Groudine; Geoffrey M Wahl
Journal:  Mol Cell Biol       Date:  2002-01       Impact factor: 4.272

2.  A topoisomerase II-dependent mechanism for resetting replicons at the S-M-phase transition.

Authors:  Olivier Cuvier; Slavica Stanojcic; Jean-Marc Lemaitre; Marcel Mechali
Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

3.  Attachment to the nuclear matrix mediates specific alterations in chromatin structure.

Authors:  A Pemov; S Bavykin; J L Hamlin
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

4.  Preferential localization of human origins of DNA replication at the 5'-ends of expressed genes and at evolutionarily conserved DNA sequences.

Authors:  Manuel S Valenzuela; Yidong Chen; Sean Davis; Fan Yang; Robert L Walker; Sven Bilke; John Lueders; Melvenia M Martin; Mirit I Aladjem; Pierre P Massion; Paul S Meltzer
Journal:  PLoS One       Date:  2011-05-13       Impact factor: 3.240

5.  Differential chromatin structure encompassing replication origins in transformed and normal cells.

Authors:  Domenic Di Paola; Emmanouil Rampakakis; Man Kid Chan; Maria Zannis-Hadjopoulos
Journal:  Genes Cancer       Date:  2012-02

6.  Initiation sites are distributed at frequent intervals in the Chinese hamster dihydrofolate reductase origin of replication but are used with very different efficiencies.

Authors:  Pieter A Dijkwel; Shuntai Wang; Joyce L Hamlin
Journal:  Mol Cell Biol       Date:  2002-05       Impact factor: 4.272

7.  Predictable dynamic program of timing of DNA replication in human cells.

Authors:  Romain Desprat; Danielle Thierry-Mieg; Nathalie Lailler; Julien Lajugie; Carl Schildkraut; Jean Thierry-Mieg; Eric E Bouhassira
Journal:  Genome Res       Date:  2009-09-18       Impact factor: 9.043

8.  The human beta-globin replication initiation region consists of two modular independent replicators.

Authors:  Lixin Wang; Chii-Mei Lin; Sarah Brooks; Dan Cimbora; Mark Groudine; Mirit I Aladjem
Journal:  Mol Cell Biol       Date:  2004-04       Impact factor: 4.272

9.  The dihydrofolate reductase origin of replication does not contain any nonredundant genetic elements required for origin activity.

Authors:  L D Mesner; X Li; P A Dijkwel; J L Hamlin
Journal:  Mol Cell Biol       Date:  2003-02       Impact factor: 4.272

10.  Increased origin activity in transformed versus normal cells: identification of novel protein players involved in DNA replication and cellular transformation.

Authors:  Domenic Di Paola; Emmanouil Rampakakis; Man Kid Chan; Dina N Arvanitis; Maria Zannis-Hadjopoulos
Journal:  Nucleic Acids Res       Date:  2010-01-11       Impact factor: 16.971

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