Literature DB >> 9405625

Chemical complementation identifies a proton acceptor for redox-active tyrosine D in photosystem II.

S Kim1, J Liang, B A Barry.   

Abstract

Through the use of site-directed mutagenesis and chemical rescue, we have identified the proton acceptor for redox-active tyrosine D in photosystem II (PSII). Effects of chemical rescue on the tyrosyl radical were monitored by EPR spectroscopy. We also have acquired the Fourier-transform infrared (FT-IR) spectrum associated with the oxidation of tyrosine D and concomitant protonation of the acceptor. Mutant and isotopically labeled PSII samples are used to assign vibrational lines in the 3,600-3,100 cm-1 region to N-H modes of His-189 in the D2 polypeptide. When His-189 in D2 is changed to a leucine (HL189D2) in PSII, dramatic alterations of both EPR and FT-IR spectra are observed. When imidazole is introduced into HL189D2 samples, results from both EPR and FT-IR spectroscopy argue that imidazole is functionally reconstituted into an accessible pocket and that imidazole acts as a chemical mimic for His-189. Small perturbations of EPR and FT-IR spectra are consistent with access to this pocket in wild-type PSII, as well. Structures of the analogous site in bacterial reaction centers suggest that an accessible pocket, large enough to contain imidazole, is bordered by tyrosine D and His-189 in the D2 polypeptide. These data provide evidence that His-189 in the D2 polypeptide of PSII acts as a proton acceptor for redox-active tyrosine D and that proton transfer to the imidazole ring facilitates the efficient oxidation/reduction of tyrosine D.

Entities:  

Year:  1997        PMID: 9405625      PMCID: PMC24999          DOI: 10.1073/pnas.94.26.14406

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

Review 1.  Tyrosyl radicals and their role in hydroperoxide-dependent activation and inactivation of prostaglandin endoperoxide synthase.

Authors:  W L Smith; T E Eling; R J Kulmacz; L J Marnett; A Tsai
Journal:  Biochemistry       Date:  1992-01-14       Impact factor: 3.162

2.  Mg coordination by amino acid side chains is not required for assembly and function of the special pair in bacterial photosynthetic reaction centers.

Authors:  J O Goldsmith; B King; S G Boxer
Journal:  Biochemistry       Date:  1996-02-20       Impact factor: 3.162

3.  Location and magnetic relaxation properties of the stable tyrosine radical in photosystem II.

Authors:  J B Innes; G W Brudvig
Journal:  Biochemistry       Date:  1989-02-07       Impact factor: 3.162

4.  Tyrosine radicals are involved in the photosynthetic oxygen-evolving system.

Authors:  B A Barry; G T Babcock
Journal:  Proc Natl Acad Sci U S A       Date:  1987-10       Impact factor: 11.205

5.  Site-directed mutagenesis in photosystem II of the cyanobacterium Synechocystis sp. PCC 6803: Donor D is a tyrosine residue in the D2 protein.

Authors:  W F Vermass; A W Rutherford; O Hansson
Journal:  Proc Natl Acad Sci U S A       Date:  1988-11       Impact factor: 11.205

6.  Isolation of a photosystem II reaction center consisting of D-1 and D-2 polypeptides and cytochrome b-559.

Authors:  O Nanba; K Satoh
Journal:  Proc Natl Acad Sci U S A       Date:  1987-01       Impact factor: 11.205

7.  245 GHz high-field EPR study of tyrosine-D zero and tyrosine-Z zero in mutants of photosystem II.

Authors:  S Un; X S Tang; B A Diner
Journal:  Biochemistry       Date:  1996-01-23       Impact factor: 3.162

8.  Characterization of the free radical of mammalian ribonucleotide reductase.

Authors:  A Gräslund; A Ehrenberg; L Thelander
Journal:  J Biol Chem       Date:  1982-05-25       Impact factor: 5.157

9.  A difference Fourier-transform infrared study of two redox-active tyrosine residues in photosystem II.

Authors:  G M MacDonald; K A Bixby; B A Barry
Journal:  Proc Natl Acad Sci U S A       Date:  1993-12-01       Impact factor: 11.205

10.  Structure of donor side components in photosystem II predicted by computer modelling.

Authors:  B Svensson; I Vass; E Cedergren; S Styring
Journal:  EMBO J       Date:  1990-07       Impact factor: 11.598

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  16 in total

1.  A Difference Fourier transform infrared study of tyrosyl radical Z* decay in photosystem II.

Authors:  I Ayala; S Kim; B A Barry
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

2.  Are proteins well-packed?

Authors:  J Liang; K A Dill
Journal:  Biophys J       Date:  2001-08       Impact factor: 4.033

3.  Proton Coupled Electron Transfer and Redox Active Tyrosines: Structure and Function of the Tyrosyl Radicals in Ribonucleotide Reductase and Photosystem II.

Authors:  Bridgette A Barry; Jun Chen; James Keough; David Jenson; Adam Offenbacher; Cynthia Pagba
Journal:  J Phys Chem Lett       Date:  2012-02-08       Impact factor: 6.475

4.  CASTp: Computed Atlas of Surface Topography of proteins.

Authors:  T Andrew Binkowski; Shapor Naghibzadeh; Jie Liang
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

5.  Anatomy of protein pockets and cavities: measurement of binding site geometry and implications for ligand design.

Authors:  J Liang; H Edelsbrunner; C Woodward
Journal:  Protein Sci       Date:  1998-09       Impact factor: 6.725

6.  Structure-function relationships in the hammerhead ribozyme probed by base rescue.

Authors:  A Peracchi; J Matulic-Adamic; S Wang; L Beigelman; D Herschlag
Journal:  RNA       Date:  1998-11       Impact factor: 4.942

7.  Proton-coupled electron transfer: Free radicals under control.

Authors:  Bridgette A Barry
Journal:  Nat Chem       Date:  2014-05       Impact factor: 24.427

8.  The protein environment surrounding tyrosyl radicals D. and Z. in photosystem II: a difference Fourier-transform infrared spectroscopic study.

Authors:  S Kim; B A Barry
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

9.  Investigating structural changes induced by nucleotide binding to RecA using difference FTIR.

Authors:  Blaine C Butler; Ross H Hanchett; Helena Rafailov; Gina MacDonald
Journal:  Biophys J       Date:  2002-04       Impact factor: 4.033

Review 10.  Proton coupled electron transfer and redox active tyrosines in Photosystem II.

Authors:  Bridgette A Barry
Journal:  J Photochem Photobiol B       Date:  2011-03-17       Impact factor: 6.252

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