Literature DB >> 9405609

Hydrophobic sequence minimization of the alpha-lactalbumin molten globule.

L C Wu1, P S Kim.   

Abstract

The molten globule, a widespread protein-folding intermediate, can attain a native-like backbone topology, even in the apparent absence of rigid side-chain packing. Nonetheless, mutagenesis studies suggest that molten globules are stabilized by some degree of side-chain packing among specific hydrophobic residues. Here we investigate the importance of hydrophobic side-chain diversity in determining the overall fold of the alpha-lactalbumin molten globule. We have replaced all of the hydrophobic amino acids in the sequence of the helical domain with a representative amino acid, leucine. Remarkably, the minimized molecule forms a molten globule that retains many structural features characteristic of a native alpha-lactalbumin fold. Thus, nonspecific hydrophobic interactions may be sufficient to determine the global fold of a protein.

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Year:  1997        PMID: 9405609      PMCID: PMC24957          DOI: 10.1073/pnas.94.26.14314

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  50 in total

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Authors:  J S Richardson; D C Richardson
Journal:  Science       Date:  1988-06-17       Impact factor: 47.728

3.  Helix signals in proteins.

Authors:  L G Presta; G D Rose
Journal:  Science       Date:  1988-06-17       Impact factor: 47.728

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Authors:  A R Davidson; K J Lumb; R T Sauer
Journal:  Nat Struct Biol       Date:  1995-10

5.  Packing interactions in the apomyglobin folding intermediate.

Authors:  M S Kay; R L Baldwin
Journal:  Nat Struct Biol       Date:  1996-05

6.  Structural characterization of a highly-ordered 'molten globule' at low pH.

Authors:  C Redfield; R A Smith; C M Dobson
Journal:  Nat Struct Biol       Date:  1994-01

7.  Solution structure of apocytochrome b562.

Authors:  Y Feng; S G Sligar; A J Wand
Journal:  Nat Struct Biol       Date:  1994-01

Review 8.  An analysis of packing in the protein folding problem.

Authors:  F M Richards; W A Lim
Journal:  Q Rev Biophys       Date:  1993-11       Impact factor: 5.318

9.  Intramolecular disulfide loop formation in a peptide containing two cysteines.

Authors:  G H Snyder
Journal:  Biochemistry       Date:  1987-02-10       Impact factor: 3.162

10.  Does the molten globule have a native-like tertiary fold?

Authors:  Z Y Peng; L C Wu; B A Schulman; P S Kim
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1995-04-29       Impact factor: 6.237

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  7 in total

1.  Limited proteolysis of bovine alpha-lactalbumin: isolation and characterization of protein domains.

Authors:  P Polverino de Laureto; E Scaramella; M Frigo; F G Wondrich; V De Filippis; M Zambonin; A Fontana
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

2.  Multiple subsets of side-chain packing in partially folded states of alpha-lactalbumins.

Authors:  K Hun Mok; Toshio Nagashima; Iain J Day; P J Hore; Christopher M Dobson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-13       Impact factor: 11.205

3.  Compactness of the kinetic molten globule of bovine alpha-lactalbumin: a dynamic light scattering study.

Authors:  K Gast; D Zirwer; M Müller-Frohne; G Damaschun
Journal:  Protein Sci       Date:  1998-09       Impact factor: 6.725

Review 4.  Polymer principles and protein folding.

Authors:  K A Dill
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

5.  A model of dynamic side-chain--side-chain interactions in the alpha-lactalbumin molten globule.

Authors:  P Bai; J Song; L Luo; Z Y Peng
Journal:  Protein Sci       Date:  2001-01       Impact factor: 6.725

6.  α-Helix mimicry with α/β-peptides.

Authors:  Lisa M Johnson; Samuel H Gellman
Journal:  Methods Enzymol       Date:  2013       Impact factor: 1.600

7.  Low resolution solution structure of HAMLET and the importance of its alpha-domains in tumoricidal activity.

Authors:  C S James Ho; Anna Rydstrom; Malathy Sony Subramanian Manimekalai; Catharina Svanborg; Gerhard Grüber
Journal:  PLoS One       Date:  2012-12-27       Impact factor: 3.240

  7 in total

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