Literature DB >> 9398423

Determination of the Main Forces Driving DNA Oligonucleotide Adsorption onto Aminated Silica Wafers

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Abstract

The adsorption of a 20-base long 5'-amino-linked oligodeoxyribonucleotide (ODN) onto aminopropylsilane-modified silica wafers has been investigated. At first, silanized surfaces were characterized by contact angle measurements, X-ray photoelectron spectroscopy (XPS), ellipsometry, and atomic force microscopy (AFM). Adsorbed amount of oligonucleotides was estimated by radioactive counting or colorimetric hybridization reaction. The first technique was useful for direct counting, while colorimetric detection, implying an hybridization reaction between adsorbed ODN and its complementary sequence, provided information about its accessibility on the wafer. With the purpose of determining the driving forces of the ODN adsorption onto these surfaces, conditions such as initial ODN concentration, pH, and ionic strength have been examined. The adsorption process could be described as a Langmuir reversible adsorption type. Surface charge contribution has been investigated by raising pH values from 4 to 10.8. Electrostatic interactions between the negatively charged ODN and the aminated groups on the silica wafers were found to play a major role in the adsorption process. Moreover, a drastic influence of the ionic strength on the ODN adsorbed amount was evidenced. Copyright 1997 Academic Press. Copyright 1997Academic Press

Entities:  

Year:  1997        PMID: 9398423     DOI: 10.1006/jcis.1997.5123

Source DB:  PubMed          Journal:  J Colloid Interface Sci        ISSN: 0021-9797            Impact factor:   8.128


  8 in total

1.  Multiphasic DNA adsorption to silica surfaces under varying buffer, pH, and ionic strength conditions.

Authors:  Peter E Vandeventer; Jessica S Lin; Theodore J Zwang; Ali Nadim; Malkiat S Johal; Angelika Niemz
Journal:  J Phys Chem B       Date:  2012-05-08       Impact factor: 2.991

2.  Covalent immobilization of microtubules on glass surfaces for molecular motor force measurements and other single-molecule assays.

Authors:  Matthew P Nicholas; Lu Rao; Arne Gennerich
Journal:  Methods Mol Biol       Date:  2014

3.  Water-silica force field for simulating nanodevices.

Authors:  Eduardo R Cruz-Chu; Aleksei Aksimentiev; Klaus Schulten
Journal:  J Phys Chem B       Date:  2006-11-02       Impact factor: 2.991

4.  Electrostatic and hydrophobic interactions involved in CNT biofunctionalization with short ss-DNA.

Authors:  Maria Lucrecia Carot; Roberto M Torresi; Carlos D Garcia; Maria Jose Esplandiu; Carla E Giacomelli
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2010-03-18       Impact factor: 4.126

5.  Evaluation of adsorption of DNA/PEI polyplexes to tubing materials.

Authors:  Tobias W M Keil; Natalie Deiringer; Wolfgang Friess; Olivia M Merkel
Journal:  Eur J Pharm Biopharm       Date:  2022-08-27       Impact factor: 5.589

6.  Oxide Formation on Biological Nanostructures via a Structure-Directing Agent: Towards an Understanding of Precise Structural Transcription.

Authors:  Fuke Wang; Susan L Nimmo; Binrui Cao; Chuanbin Mao
Journal:  Chem Sci       Date:  2012-08-01       Impact factor: 9.825

7.  Adsorption Kinetics of Single-Stranded DNA on Functional Silica Surfaces and Its Influence Factors: An Evanescent-Wave Biosensor Study.

Authors:  Jun Wu; Hongliang Wang; Anna Zhu; Feng Long
Journal:  ACS Omega       Date:  2018-05-25

8.  Drop drying on surfaces determines chemical reactivity - the specific case of immobilization of oligonucleotides on microarrays.

Authors:  Jens Sobek; Catharine Aquino; Wilfried Weigel; Ralph Schlapbach
Journal:  BMC Biophys       Date:  2013-06-12       Impact factor: 4.778

  8 in total

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