Literature DB >> 9398292

Identification of catalytically important residues in yeast transketolase.

C Wikner1, U Nilsson, L Meshalkina, C Udekwu, Y Lindqvist, G Schneider.   

Abstract

The possible roles of four histidine residues in the active site of yeast transketolase were examined by site-directed mutagenesis. Replacement of the invariant His69 with alanine yielded a mutant enzyme with 1.5% of the specific activity of the wild-type enzyme and with an increased KM for the donor. This residue is located at the bottom of the substrate cleft close to the C1 hydroxyl group of the donor substrate, and the side chain of His69 might be required for recognition of this hydroxyl group and possibly for maintenance of the proper orientation of the reaction intermediate, (alpha, beta-dihydroxyethyl)thiamin diphosphate. Amino acid replacements of His481 by alanine, serine, and glutamine resulted in mutant enzymes with significantly increased KM values for the donor substrate and specific activities of 4.4%, 1.9%, and 5.5% of the wild-type enzyme. The kinetic data suggest that this residue, although close to the C2 carbonyl oxygen of the substrate, is not absolutely required for stabilization of the negative charge that develops at this oxygen in the transition state. This points toward the 4'-NH2 group of the pyrimidine ring of thiamin diphosphate as the major source of charge stabilization. Mutations at positions His30 and His263 result in mutant enzymes severely impaired in catalytic activity (1.5% and less of the activity of wild-type transketolase). The KM value for the donor substrate was increased for the His30Ala mutant but remained unchanged in the His263Ala enzyme. The side chains of both residues interact with the C3 hydroxyl group of the donor substrate, and the results indicate that the two residues act in concert during proton abstraction of the C3 hydroxyl proton during catalysis.

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Year:  1997        PMID: 9398292     DOI: 10.1021/bi971606b

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  18 in total

1.  Crystal structures of phosphoketolase: thiamine diphosphate-dependent dehydration mechanism.

Authors:  Ryuichiro Suzuki; Takane Katayama; Byung-Jun Kim; Takayoshi Wakagi; Hirofumi Shoun; Hisashi Ashida; Kenji Yamamoto; Shinya Fushinobu
Journal:  J Biol Chem       Date:  2010-08-24       Impact factor: 5.157

2.  1-Deoxy-D-xylulose 5-phosphate synthase, the gene product of open reading frame (ORF) 2816 and ORF 2895 in Rhodobacter capsulatus.

Authors:  F M Hahn; L M Eubanks; C A Testa; B S Blagg; J A Baker; C D Poulter
Journal:  J Bacteriol       Date:  2001-01       Impact factor: 3.490

3.  The crystal structure of human transketolase and new insights into its mode of action.

Authors:  Lars Mitschke; Christoph Parthier; Kathrin Schröder-Tittmann; Johannes Coy; Stefan Lüdtke; Kai Tittmann
Journal:  J Biol Chem       Date:  2010-07-28       Impact factor: 5.157

4.  Plasmid-dependent methylotrophy in thermotolerant Bacillus methanolicus.

Authors:  Trygve Brautaset; Øyvind M Jakobsen M; Michael C Flickinger; Svein Valla; Trond E Ellingsen
Journal:  J Bacteriol       Date:  2004-03       Impact factor: 3.490

5.  Structural studies of thiamin monophosphate kinase in complex with substrates and products.

Authors:  Kathryn M McCulloch; Cynthia Kinsland; Tadhg P Begley; Steven E Ealick
Journal:  Biochemistry       Date:  2008-03-01       Impact factor: 3.162

6.  Evolutionary analysis of the TPP-dependent enzyme family.

Authors:  Seán J Costelloe; John M Ward; Paul A Dalby
Journal:  J Mol Evol       Date:  2007-11-28       Impact factor: 2.395

7.  Cloning, expression and characterization of sugarcane (Saccharum officinarum L.) transketolase.

Authors:  Nahid Kalhori; R Nulit; Rusea Go
Journal:  Protein J       Date:  2013-10       Impact factor: 2.371

8.  Diphenyl urea derivatives as inhibitors of transketolase: a structure-based virtual screening.

Authors:  Cristian Obiol-Pardo; Gema Alcarraz-Vizán; Marta Cascante; Jaime Rubio-Martinez
Journal:  PLoS One       Date:  2012-03-05       Impact factor: 3.240

9.  A δ38 deletion variant of human transketolase as a model of transketolase-like protein 1 exhibits no enzymatic activity.

Authors:  Stefan Schneider; Stefan Lüdtke; Kathrin Schröder-Tittmann; Cindy Wechsler; Danilo Meyer; Kai Tittmann
Journal:  PLoS One       Date:  2012-10-31       Impact factor: 3.240

10.  A metabolic prototype for eliminating tryptophan from the genetic code.

Authors:  V Pezo; D Louis; V Guérineau; J-P Le Caer; L Gaillon; R Mutzel; P Marlière
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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