Literature DB >> 9398223

Microscopic pKa values of Escherichia coli thioredoxin.

P T Chivers1, K E Prehoda, B F Volkman, B M Kim, J L Markley, R T Raines.   

Abstract

Thiol:disulfide oxidoreductases have a CXXC motif within their active sites. To initiate the reduction of a substrate disulfide bond, the thiolate form of the N-terminal cysteine residue (CXXC) of this motif performs a nucleophilic attack. Escherichia coli thioredoxin [Trx (CGPC)] is the best characterized thiol:disulfide oxidoreductase. Previous determinations of the active-site pKa values of Trx have led to conflicting interpretations. Here, 13C-NMR spectroscopy, site-specific isotopic labeling, and site-directed mutagenesis were used to demonstrate that analysis of the titration behavior of wild-type Trx requires the invocation of microscopic pKa values for two interacting active-site residues: Asp26 (7.5 and 9.2) and Cys32 (CXXC; 7.5 and 9.2). By contrast, in two Trx variants, D26N Trx and D26L Trx, Cys32 exhibits a pKa near 7.5 and has a well-defined, single-pKa titration curve. Similarly, in oxidized wild-type Trx, Asp26 has a pKa near 7.5. In CVWC and CWGC Trx, Cys32 exhibits a single pKa near 6.2. In all five enzymes studied here, there is no evidence for a Cys35 (CXXC) pKa of < 11. This study demonstrates that a comprehensive approach must be used to unravel complex titration behavior of the functional groups in a protein.

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Year:  1997        PMID: 9398223     DOI: 10.1021/bi970071j

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  63 in total

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4.  pH dependence of amide chemical shifts in natively disordered polypeptides detects medium-range interactions with ionizable residues.

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5.  Use of 2,3,5-F(3)Y-β2 and 3-NH(2)Y-α2 to study proton-coupled electron transfer in Escherichia coli ribonucleotide reductase.

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Journal:  Biochemistry       Date:  2011-02-08       Impact factor: 3.162

6.  Re-engineering redox-sensitive green fluorescent protein for improved response rate.

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7.  An additional function of the rough endoplasmic reticulum protein complex prolyl 3-hydroxylase 1·cartilage-associated protein·cyclophilin B: the CXXXC motif reveals disulfide isomerase activity in vitro.

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8.  Nitric oxide and thioredoxin type 1 modulate the activity of caspase 8 in HepG2 cells.

Authors:  Rajib Sengupta; Timothy R Billiar; Valerian E Kagan; Detcho A Stoyanovsky
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9.  The CXC motif: a functional mimic of protein disulfide isomerase.

Authors:  Kenneth J Woycechowsky; Ronald T Raines
Journal:  Biochemistry       Date:  2003-05-13       Impact factor: 3.162

10.  Improved pKa calculations through flexibility based sampling of a water-dominated interaction scheme.

Authors:  Jim Warwicker
Journal:  Protein Sci       Date:  2004-10       Impact factor: 6.725

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