Literature DB >> 9390404

Three-dimensional structure of the Hck SH2 domain in solution.

W Zhang1, T E Smithgall, W H Gmeiner.   

Abstract

The hematopoietic cellular kinase (Hck) is a member of the Src family of non-receptor protein-tyrosine kinases that is expressed predominantly in granulocytes, monocytes and macrophages. Recent observations suggest that Hck may be activated in HIV-infected macrophages and in chronic myelogenous leukemia cells that express Bcr-Abl. In order to increase our understanding of the structural basis for regulation of Hck activity under normal and pathological conditions, we have solved the solution structure of the uncomplexed Hck SH2 domain using NMR spectroscopy. A novel procedure that uses intraresidue HN-H alpha distances as references for converting NOE intensities into distance restraints has been described. A total of 1757 significant experimental restraints were derived from NMR spectroscopic data including 238 medium-range and 487 long-range distance restraints and 177 torsion angle restraints. These restraints were used in a simulated annealing procedure to generate 20 structures with the program DYANA. Superimposition of residues 5-104 upon the mean coordinate set yielded an average atomic rmsd values of 0.42 +/- 0.08 A for the N,C alpha,C' atoms and 0.81 +/- 0.08 A for all heavy atoms. Rmsd values for those residues in the regions of ordered secondary structure were 0.27 +/- 0.04 A for the N,C alpha,C' atoms and 0.73 +/- 0.06 A for all heavy atoms.

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Year:  1997        PMID: 9390404     DOI: 10.1023/a:1018386217930

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  38 in total

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Authors:  G Waksman; S E Shoelson; N Pant; D Cowburn; J Kuriyan
Journal:  Cell       Date:  1993-03-12       Impact factor: 41.582

2.  Crystal structure of the Src family tyrosine kinase Hck.

Authors:  F Sicheri; I Moarefi; J Kuriyan
Journal:  Nature       Date:  1997-02-13       Impact factor: 49.962

3.  A tail of two src's: mutatis mutandis.

Authors:  T Hunter
Journal:  Cell       Date:  1987-04-10       Impact factor: 41.582

4.  Isolation and sequence of a cDNA corresponding to a src-related gene expressed in murine hemopoietic cells.

Authors:  D A Holtzman; W D Cook; A R Dunn
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

6.  Improved 3D gd-HCACO and gd-(H)CACO-TOCSY experiments for isotopically enriched proteins dissolved in H2O.

Authors:  W Zhang; W H Gmeiner
Journal:  J Biomol NMR       Date:  1996-05       Impact factor: 2.835

7.  Activation of Src kinases p53/56lyn and p59hck by p210bcr/abl in myeloid cells.

Authors:  S Danhauser-Riedl; M Warmuth; B J Druker; B Emmerich; M Hallek
Journal:  Cancer Res       Date:  1996-08-01       Impact factor: 12.701

8.  Resonance assignment of methionine methyl groups and chi 3 angular information from long-range proton-carbon and carbon-carbon J correlation in a calmodulin-peptide complex.

Authors:  A Bax; F Delaglio; S Grzesiek; G W Vuister
Journal:  J Biomol NMR       Date:  1994-11       Impact factor: 2.835

9.  Crystal structures of the human p56lck SH2 domain in complex with two short phosphotyrosyl peptides at 1.0 A and 1.8 A resolution.

Authors:  L Tong; T C Warren; J King; R Betageri; J Rose; S Jakes
Journal:  J Mol Biol       Date:  1996-03-01       Impact factor: 5.469

10.  Solution structure of the human pp60c-src SH2 domain complexed with a phosphorylated tyrosine pentapeptide.

Authors:  R X Xu; J M Word; D G Davis; M J Rink; D H Willard; R T Gampe
Journal:  Biochemistry       Date:  1995-02-21       Impact factor: 3.162

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  6 in total

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Authors:  Theresa A Ramelot; Shuisong Ni; Sharon Goldsmith-Fischman; John R Cort; Barry Honig; Michael A Kennedy
Journal:  Protein Sci       Date:  2003-07       Impact factor: 6.725

2.  Solution structure of the yeast ubiquitin-like modifier protein Hub1.

Authors:  Theresa A Ramelot; John R Cort; Adelinda A Yee; Anthony Semesi; Aled M Edwards; Cheryl H Arrowsmith; Michael A Kennedy
Journal:  J Struct Funct Genomics       Date:  2003

3.  Solution structure of a zinc substituted eukaryotic rubredoxin from the cryptomonad alga Guillardia theta.

Authors:  K Schweimer; S Hoffmann; J Wastl; U G Maier; P Rösch; H Sticht
Journal:  Protein Sci       Date:  2000-08       Impact factor: 6.725

4.  Solution structure and proposed domain domain recognition interface of an acyl carrier protein domain from a modular polyketide synthase.

Authors:  Viktor Y Alekseyev; Corey W Liu; David E Cane; Joseph D Puglisi; Chaitan Khosla
Journal:  Protein Sci       Date:  2007-10       Impact factor: 6.725

5.  Mutational epitope analysis of Pru av 1 and Api g 1, the major allergens of cherry (Prunus avium) and celery (Apium graveolens): correlating IgE reactivity with three-dimensional structure.

Authors:  Philipp Neudecker; Katrin Lehmann; Jörg Nerkamp; Tanja Haase; Andrea Wangorsch; Kay Fötisch; Silke Hoffmann; Paul Rösch; Stefan Vieths; Stephan Scheurer
Journal:  Biochem J       Date:  2003-11-15       Impact factor: 3.857

6.  Solution structure of the autophagy-related protein LC3C reveals a polyproline II motif on a mobile tether with phosphorylation site.

Authors:  Carsten Krichel; Christina Möckel; Oliver Schillinger; Pitter F Huesgen; Heinrich Sticht; Birgit Strodel; Oliver H Weiergräber; Dieter Willbold; Philipp Neudecker
Journal:  Sci Rep       Date:  2019-10-02       Impact factor: 4.379

  6 in total

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