Literature DB >> 9370444

Transmembrane four-helix bundle of influenza A M2 protein channel: structural implications from helix tilt and orientation.

F A Kovacs1, T A Cross.   

Abstract

The transmembrane portion of the M2 protein from the Influenza A virus has been studied in hydrated dimyristroylphosphotidylcholine lipid bilayers with solid-state NMR. Orientational constraints were obtained from isotopically labeled peptide samples mechanically aligned between thin glass plates. 15N chemical shifts from single site labeled samples constrain the molecular frame with respect to the magnetic field. When these constraints are applied to the peptide, modeled as a uniform alpha-helix, the tilt of the helix with respect to the bilayer normal was determined to be 33 degrees +/- 3 degrees. Furthermore, the orientation about the helix axis was also determined within an error of +/- 30 degrees. These results imply that the packing of this tetrameric protein is in a left-handed four-helix bundle. Only with such a large tilt angle are the hydrophilic residues aligned to the channel axis.

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Year:  1997        PMID: 9370444      PMCID: PMC1181152          DOI: 10.1016/S0006-3495(97)78279-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  31 in total

1.  Orientational constraints as three-dimensional structural constraints from chemical shift anisotropy: the polypeptide backbone of gramicidin A in a lipid bilayer.

Authors:  W Mai; W Hu; C Wang; T A Cross
Journal:  Protein Sci       Date:  1993-04       Impact factor: 6.725

2.  High-resolution conformation of gramicidin A in a lipid bilayer by solid-state NMR.

Authors:  R R Ketchem; W Hu; T A Cross
Journal:  Science       Date:  1993-09-10       Impact factor: 47.728

3.  Three-dimensional structure of bovine cytochrome bc1 complex by electron cryomicroscopy and helical image reconstruction.

Authors:  T Akiba; C Toyoshima; T Matsunaga; M Kawamoto; T Kubota; K Fukuyama; K Namba; H Matsubara
Journal:  Nat Struct Biol       Date:  1996-06

4.  fd coat protein structure in membrane environments.

Authors:  P A McDonnell; K Shon; Y Kim; S J Opella
Journal:  J Mol Biol       Date:  1993-10-05       Impact factor: 5.469

5.  Atomic model of plant light-harvesting complex by electron crystallography.

Authors:  W Kühlbrandt; D N Wang; Y Fujiyoshi
Journal:  Nature       Date:  1994-02-17       Impact factor: 49.962

6.  Membrane orientation of the N-terminal segment of alamethicin determined by solid-state 15N NMR.

Authors:  C L North; M Barranger-Mathys; D S Cafiso
Journal:  Biophys J       Date:  1995-12       Impact factor: 4.033

7.  The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A.

Authors:  T Tsukihara; H Aoyama; E Yamashita; T Tomizaki; H Yamaguchi; K Shinzawa-Itoh; R Nakashima; R Yaono; S Yoshikawa
Journal:  Science       Date:  1996-05-24       Impact factor: 47.728

8.  Structure and orientation of the pore-forming peptide, melittin, in lipid bilayers.

Authors:  R Smith; F Separovic; T J Milne; A Whittaker; F M Bennett; B A Cornell; A Makriyannis
Journal:  J Mol Biol       Date:  1994-08-19       Impact factor: 5.469

9.  The structure of an integral membrane peptide: a deuterium NMR study of gramicidin.

Authors:  R S Prosser; S I Daleman; J H Davis
Journal:  Biophys J       Date:  1994-05       Impact factor: 4.033

10.  Analysis of the posttranslational modifications of the influenza virus M2 protein.

Authors:  L J Holsinger; M A Shaughnessy; A Micko; L H Pinto; R A Lamb
Journal:  J Virol       Date:  1995-02       Impact factor: 5.103

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  75 in total

1.  Correlation of the structural and functional domains in the membrane protein Vpu from HIV-1.

Authors:  F M Marassi; C Ma; H Gratkowski; S K Straus; K Strebel; M Oblatt-Montal; M Montal; S J Opella
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-07       Impact factor: 11.205

2.  Orientation of cecropin A helices in phospholipid bilayers determined by solid-state NMR spectroscopy.

Authors:  F M Marassi; S J Opella; P Juvvadi; R B Merrifield
Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

3.  vpu transmembrane peptide structure obtained by site-specific fourier transform infrared dichroism and global molecular dynamics searching.

Authors:  A Kukol; I T Arkin
Journal:  Biophys J       Date:  1999-09       Impact factor: 4.033

4.  pH-dependent tetramerization and amantadine binding of the transmembrane helix of M2 from the influenza A virus.

Authors:  D Salom; B R Hill; J D Lear; W F DeGrado
Journal:  Biochemistry       Date:  2000-11-21       Impact factor: 3.162

5.  Transmembrane domain of M2 protein from influenza A virus studied by solid-state (15)N polarization inversion spin exchange at magic angle NMR.

Authors:  Z Song; F A Kovacs; J Wang; J K Denny; S C Shekar; J R Quine; T A Cross
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

6.  C-deuterated alanine: a new label to study membrane protein structure using site-specific infrared dichroism.

Authors:  Jaume Torres; Isaiah T Arkin
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

Review 7.  Nuclear magnetic resonance of membrane-associated peptides and proteins.

Authors:  S J Opella; C Ma; F M Marassi
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

8.  Structure of the transmembrane region of the M2 protein H(+) channel.

Authors:  J Wang; S Kim; F Kovacs; T A Cross
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

9.  Contribution of energy values to the analysis of global searching molecular dynamics simulations of transmembrane helical bundles.

Authors:  Jaume Torres; John A G Briggs; Isaiah T Arkin
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

10.  Effect of cytoplasmic tail truncations on the activity of the M(2) ion channel of influenza A virus.

Authors:  K Tobler; M L Kelly; L H Pinto; R A Lamb
Journal:  J Virol       Date:  1999-12       Impact factor: 5.103

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