Literature DB >> 9360606

Neutron Laue diffractometry with an imaging plate provides an effective data collection regime for neutron protein crystallography.

N Niimura1, Y Minezaki, T Nonaka, J C Castagna, F Cipriani, P Høghøj, M S Lehmann, C Wilkinson.   

Abstract

Neutron quasi-Laue diffraction data (2 A resolution) from tetragonal hen egg-white lysozyme were collected in ten days with neutron imaging plates. The data processing Laue software, LAUEGEN, developed for X-ray Laue diffractometry, was adapted for neutron diffractometry with a cylindrical detector. The data analysis software, X-PLOR, was modified and used for the refinement of hydrogen atoms, and the positions of 960 hydrogen atoms in the protein and 157 bound water molecules, were determined. Several examples are given of the methods used to identify hydrogen atoms and water molecules.

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Year:  1997        PMID: 9360606     DOI: 10.1038/nsb1197-909

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  24 in total

1.  Modeling the hydration of proteins: prediction of structural and hydrodynamic parameters from X-ray diffraction and scattering data.

Authors:  Helmut Durchschlag; Peter Zipper
Journal:  Eur Biophys J       Date:  2003-04-25       Impact factor: 1.733

2.  A model for water motion in crystals of lysozyme based on an incoherent quasielastic neutron-scattering study.

Authors:  C Bon; A J Dianoux; M Ferrand; M S Lehmann
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

3.  Neutron crystallographic study on rubredoxin from Pyrococcus furiosus by BIX-3, a single-crystal diffractometer for biomacromolecules.

Authors:  Kazuo Kurihara; Ichiro Tanaka; Toshiyuki Chatake; Michael W W Adams; Francis E Jenney; Natalia Moiseeva; Robert Bau; Nobuo Niimura
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-22       Impact factor: 11.205

4.  Asparagine and glutamine side-chain conformation in solution and crystal: a comparison for hen egg-white lysozyme using residual dipolar couplings.

Authors:  Victoria A Higman; Jonathan Boyd; Lorna J Smith; Christina Redfield
Journal:  J Biomol NMR       Date:  2004-11       Impact factor: 2.835

5.  A quasi-Laue neutron crystallographic study of D-xylose isomerase.

Authors:  Flora Meilleur; Edward H Snell; Mark J van der Woerd; Russell A Judge; Dean A A Myles
Journal:  Eur Biophys J       Date:  2006-05-04       Impact factor: 1.733

Review 6.  Neutron Laue macromolecular crystallography.

Authors:  Flora Meilleur; Dean A A Myles; Matthew P Blakeley
Journal:  Eur Biophys J       Date:  2006-08-03       Impact factor: 1.733

7.  Preliminary time-of-flight neutron diffraction study on diisopropyl fluorophosphatase (DFPase) from Loligo vulgaris.

Authors:  Marc-Michael Blum; Alexander Koglin; Heinz Rüterjans; Benno Schoenborn; Paul Langan; Julian C-H Chen
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-12-22

8.  Large-scale crystallization and neutron crystallographic analysis of HSP70 in complex with ADP.

Authors:  Takeshi Yokoyama; Andreas Ostermann; Tobias E Schrader; Mineyuki Mizuguchi
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-09-23       Impact factor: 1.056

9.  What are the current limits on determination of protonation state using neutron macromolecular crystallography?

Authors:  Dorothee Liebschner; Pavel V Afonine; Nigel W Moriarty; Paul D Adams
Journal:  Methods Enzymol       Date:  2020-02-13       Impact factor: 1.600

10.  Hydrogen atoms in proteins: positions and dynamics.

Authors:  Niklas Engler; Andreas Ostermann; Nobuo Niimura; Fritz G Parak
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-22       Impact factor: 11.205

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