Literature DB >> 9360599

Cavity formation before stable hydrogen bonding in the folding of a beta-clam protein.

P L Clark, Z P Liu, J Rizo, L M Gierasch.   

Abstract

The time course of folding of a small beta-sheet protein reveals formation of a central ligand binding cavity before the consolidation of the native hydrogen bonding network. These results suggest that side chain interactions and not stable hydrogen bonding determine the beta-sheet architecture and play crucial roles in the overall chain topology.

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Year:  1997        PMID: 9360599     DOI: 10.1038/nsb1197-883

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  18 in total

1.  Turn scanning by site-directed mutagenesis: application to the protein folding problem using the intestinal fatty acid binding protein.

Authors:  K Kim; C Frieden
Journal:  Protein Sci       Date:  1998-08       Impact factor: 6.725

2.  From the test tube to the cell: exploring the folding and aggregation of a beta-clam protein.

Authors:  Zoya Ignatova; Beena Krishnan; Jeffrey P Bombardier; Anna Marie C Marcelino; Jiang Hong; Lila M Gierasch
Journal:  Biopolymers       Date:  2007       Impact factor: 2.505

Review 3.  Roles of beta-turns in protein folding: from peptide models to protein engineering.

Authors:  Anna Marie C Marcelino; Lila M Gierasch
Journal:  Biopolymers       Date:  2008-05       Impact factor: 2.505

Review 4.  A career pathway in protein folding: from model peptides to postreductionist protein science.

Authors:  Lila M Gierasch
Journal:  Protein Sci       Date:  2011-04-04       Impact factor: 6.725

5.  Kinetic versus thermodynamic control of mutational effects on protein homeostasis: A perspective from computational modeling and experiment.

Authors:  Kristine Faye R Pobre; David L Powers; Kingshuk Ghosh; Lila M Gierasch; Evan T Powers
Journal:  Protein Sci       Date:  2019-05-24       Impact factor: 6.725

6.  Conserved and nonconserved features of the folding pathway of hisactophilin, a beta-trefoil protein.

Authors:  Chengsong Liu; Joe A Gaspar; Hannah J Wong; Elizabeth M Meiering
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

7.  Early turn formation and chain collapse drive fast folding of the major cold shock protein CspA of Escherichia coli.

Authors:  Dung M Vu; Scott H Brewer; R Brian Dyer
Journal:  Biochemistry       Date:  2012-11-01       Impact factor: 3.162

8.  Early folding events protect aggregation-prone regions of a β-rich protein.

Authors:  Ivan L Budyak; Beena Krishnan; Anna M Marcelino-Cruz; Mylene C Ferrolino; Anastasia Zhuravleva; Lila M Gierasch
Journal:  Structure       Date:  2013-03-05       Impact factor: 5.006

9.  Transporter-to-trap conversion: a disulfide bond formation in cellular retinoic acid binding protein I mutant triggered by retinoic acid binding irreversibly locks the ligand inside the protein.

Authors:  Virginie Sjoelund; Igor A Kaltashov
Journal:  Biochemistry       Date:  2007-10-24       Impact factor: 3.162

10.  Apo-nitrophorin 4 at atomic resolution.

Authors:  Angela M Amoia; William R Montfort
Journal:  Protein Sci       Date:  2007-07-27       Impact factor: 6.725

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