Literature DB >> 9357673

Query expansion using the UMLS Metathesaurus.

A R Aronson1, T C Rindflesch.   

Abstract

Recent work has demonstrated the importance of query expansion for improving retrieval effectiveness when applying statistically-based systems to MEDLINE citations. The research has suggested the use of retrieval feedback for enhancing the original text of users' queries. As an alternative method of query expansion, we propose the use of the MetaMap program for associating UMLS Metathesaurus concepts with the original query. Our experiments show that query expansion based on MetaMap compares favorably with retrieval feedback. We conclude that the optimal strategy would be to combine the two techniques.

Mesh:

Year:  1997        PMID: 9357673      PMCID: PMC2233565     

Source DB:  PubMed          Journal:  Proc AMIA Annu Fall Symp        ISSN: 1091-8280


  3 in total

1.  Retrieval feedback in MEDLINE.

Authors:  P Srinivasan
Journal:  J Am Med Inform Assoc       Date:  1996 Mar-Apr       Impact factor: 4.497

2.  Retrieval feedback for query design in MEDLINE. A comparison with expert network and LLSF approaches.

Authors:  P Srinivasan
Journal:  Proc AMIA Annu Fall Symp       Date:  1996

3.  A performance and failure analysis of SAPHIRE with a MEDLINE test collection.

Authors:  W R Hersh; D H Hickam; R B Haynes; K A McKibbon
Journal:  J Am Med Inform Assoc       Date:  1994 Jan-Feb       Impact factor: 4.497

  3 in total
  37 in total

1.  Exploring the UMLS: a rough sets based theoretical framework.

Authors:  P Srinivasan
Journal:  Proc AMIA Symp       Date:  1999

2.  UMLS concept indexing for production databases: a feasibility study.

Authors:  P Nadkarni; R Chen; C Brandt
Journal:  J Am Med Inform Assoc       Date:  2001 Jan-Feb       Impact factor: 4.497

3.  The NLM Indexing Initiative.

Authors:  A R Aronson; O Bodenreider; H F Chang; S M Humphrey; J G Mork; S J Nelson; T C Rindflesch; W J Wilbur
Journal:  Proc AMIA Symp       Date:  2000

4.  Text-based discovery in biomedicine: the architecture of the DAD-system.

Authors:  M Weeber; H Klein; A R Aronson; J G Mork; L T de Jong-van den Berg; R Vos
Journal:  Proc AMIA Symp       Date:  2000

5.  Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program.

Authors:  A R Aronson
Journal:  Proc AMIA Symp       Date:  2001

6.  MeSHmap: a text mining tool for MEDLINE.

Authors:  P Srinivasan
Journal:  Proc AMIA Symp       Date:  2001

Review 7.  An introduction to information retrieval: applications in genomics.

Authors:  P M Nadkarni
Journal:  Pharmacogenomics J       Date:  2002       Impact factor: 3.550

8.  Finding UMLS Metathesaurus concepts in MEDLINE.

Authors:  Suresh Srinivasan; Thomas C Rindflesch; William T Hole; Alan R Aronson; James G Mork
Journal:  Proc AMIA Symp       Date:  2002

9.  A study of biomedical concept identification: MetaMap vs. people.

Authors:  Wanda Pratt; Meliha Yetisgen-Yildiz
Journal:  AMIA Annu Symp Proc       Date:  2003

10.  A UML profile for the OBO relation ontology.

Authors:  Gabriela D A Guardia; Ricardo Z N Vêncio; Cléver R G de Farias
Journal:  BMC Genomics       Date:  2012-10-19       Impact factor: 3.969

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