Literature DB >> 9352934

The tigA gene is a transcriptional fusion of glycolytic genes encoding triose-phosphate isomerase and glyceraldehyde-3-phosphate dehydrogenase in oomycota.

S E Unkles1, J M Logsdon, K Robison, J R Kinghorn, J M Duncan.   

Abstract

Genes encoding triose-phosphate isomerase (TPI) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) are fused and form a single transcriptional unit (tigA) in Phytophthora species, members of the order Pythiales in the phylum Oomycota. This is the first demonstration of glycolytic gene fusion in eukaryotes and the first case of a TPI-GAPDH fusion in any organism. The tigA gene from Phytophthora infestans has a typical Oomycota transcriptional start point consensus sequence and, in common with most Phytophthora genes, has no introns. Furthermore, Southern and PCR analyses suggest that the same organization exists in other closely related genera, such as Pythium, from the same order (Oomycota), as well as more distantly related genera, Saprolegnia and Achlya, in the order Saprolegniales. Evidence is provided that in P. infestans, there is at least one other discrete copy of a GAPDH-encoding gene but not of a TPI-encoding gene. Finally, a phylogenetic analysis of TPI does not place Phytophthora within the assemblage of crown eukaryotes and suggests TPI may not be particularly useful for resolving relationships among major eukaryotic groups.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9352934      PMCID: PMC179613          DOI: 10.1128/jb.179.21.6816-6823.1997

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  36 in total

Review 1.  Kingdom protozoa and its 18 phyla.

Authors:  T Cavalier-Smith
Journal:  Microbiol Rev       Date:  1993-12

2.  Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins.

Authors:  S L Baldauf; J D Palmer
Journal:  Proc Natl Acad Sci U S A       Date:  1993-12-15       Impact factor: 11.205

3.  Structure of the large ribosomal subunit RNA of Phytophthora megasperma, and phylogeny of the oomycetes.

Authors:  G Van der Auwera; S Chapelle; R De Wachter
Journal:  FEBS Lett       Date:  1994-01-31       Impact factor: 4.124

4.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

5.  The hyperthermophilic bacterium Thermotoga neapolitana possesses two isozymes of the 3-phosphoglycerate kinase/triosephosphate isomerase fusion protein.

Authors:  J S Yu; K M Noll
Journal:  FEMS Microbiol Lett       Date:  1995-09-15       Impact factor: 2.742

6.  Structure and genomic organization of the ipiB and ipiO gene clusters of Phytophthora infestans.

Authors:  C M Pieterse; P van West; H M Verbakel; P W Brassé; G C van den Berg-Velthuis; F Govers
Journal:  Gene       Date:  1994-01-28       Impact factor: 3.688

7.  The unusually long small subunit ribosomal RNA of Phreatamoeba balamuthi.

Authors:  G Hinkle; D D Leipe; T A Nerad; M L Sogin
Journal:  Nucleic Acids Res       Date:  1994-02-11       Impact factor: 16.971

8.  Sequence analysis of duplicated actin genes in Lagenidium giganteum and Pythium irregulare (Oomycota).

Authors:  D Bhattacharya; S K Stickel
Journal:  J Mol Evol       Date:  1994-07       Impact factor: 2.395

9.  The evolutionary origin of red algae as deduced from the nuclear genes encoding cytosolic and chloroplast glyceraldehyde-3-phosphate dehydrogenases from Chondrus crispus.

Authors:  M F Liaud; C Valentin; W Martin; F Y Bouget; B Kloareg; R Cerff
Journal:  J Mol Evol       Date:  1994-04       Impact factor: 2.395

10.  Phosphoglycerate kinase and triosephosphate isomerase from the hyperthermophilic bacterium Thermotoga maritima form a covalent bifunctional enzyme complex.

Authors:  H Schurig; N Beaucamp; R Ostendorp; R Jaenicke; E Adler; J R Knowles
Journal:  EMBO J       Date:  1995-02-01       Impact factor: 11.598

View more
  3 in total

Review 1.  Rewiring and regulation of cross-compartmentalized metabolism in protists.

Authors:  Michael L Ginger; Geoffrey I McFadden; Paul A M Michels
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-03-12       Impact factor: 6.237

2.  Enzyme co-localization in pea leaf chloroplasts: glyceraldehyde-3-P dehydrogenase, triose-P isomerase, aldolase and sedoheptulose bisphosphatase.

Authors:  Louise E Anderson; Nandita Gatla; Andrew A Carol
Journal:  Photosynth Res       Date:  2005       Impact factor: 3.573

3.  ACTB and GAPDH appear at multiple SDS-PAGE positions, thus not suitable as reference genes for determining protein loading in techniques like Western blotting.

Authors:  Keyin Zhang; Ju Zhang; Nan Ding; Lucas Zellmer; Yan Zhao; Siqi Liu; Dezhong Joshua Liao
Journal:  Open Life Sci       Date:  2021-12-13       Impact factor: 0.938

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.