Literature DB >> 9344649

A sequence-ready physical map of a region of 12q24.1.

B Renault1, A Hovnanian, S Bryce, J J Chang, S Lau, A Sakuntabhai, S Monk, S Carter, C J Ross, J Pang, R Twells, S Chamberlain, A P Monaco, T Strachan, R Kucherlapati.   

Abstract

We developed a sequence-ready map of a part of human chromosome 12q24.1. We utilized a number of sequence-tagged site (STS) markers from 12q24.1 to screen large insert bacterial chromosome libraries and a chromosome 12-specific cosmid library. The clones were assembled into contiguous sets (contigs) by STS-content analysis. Contigs were extended by obtaining end sequences of bacterial clones, generation of additional STSs, rescreening the libraries, and screening the additional clones for the presence of STSs. The resulting contig covers nearly 2 Mb of DNA and provides an average marker resolution of 16 kb. Based on the STS content, we developed fingerprints of a subset of clones. The STS content and fingerprint data allowed us to define a minimal tiling path of clones. These clones are being used to sequence this part of chromosome 12. This contig contains the Ataxin 2 gene, and it covers the interval harboring the gene responsible for Darier disease. Copyright 1997 Academic Press.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9344649     DOI: 10.1006/geno.1997.4888

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  4 in total

1.  Refined genetic mapping of the darier locus to a <1-cM region of chromosome 12q24.1, and construction of a complete, high-resolution P1 artificial chromosome/bacterial artificial chromosome contig of the critical region.

Authors:  S Monk; A Sakuntabhai; S A Carter; S D Bryce; R Cox; L Harrington; E Levy; V L Ruiz-Perez; E Katsantoni; A Kodvawala; C S Munro; S Burge; M Larrègue; G Nagy; J L Rees; M Lathrop; A P Monaco; T Strachan; A Hovnanian
Journal:  Am J Hum Genet       Date:  1998-04       Impact factor: 11.025

2.  A bacterial artificial chromosome library for sequencing the complete human genome.

Authors:  K Osoegawa; A G Mammoser; C Wu; E Frengen; C Zeng; J J Catanese; P J de Jong
Journal:  Genome Res       Date:  2001-03       Impact factor: 9.043

3.  A 3-Mb high-resolution BAC/PAC contig of 12q22 encompassing the 830-kb consensus minimal deletion in male germ cell tumors.

Authors:  V V Murty; K Montgomery; S Dutta; S Bala; B Renault; G J Bosl; R Kucherlapati; R S Chaganti
Journal:  Genome Res       Date:  1999-07       Impact factor: 9.043

4.  Analysis of human sarcospan as a candidate gene for CFEOM1.

Authors:  K F O'Brien; E C Engle; L M Kunkel
Journal:  BMC Genet       Date:  2001-02-06       Impact factor: 2.797

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.