Literature DB >> 9343412

Xbp1, a stress-induced transcriptional repressor of the Saccharomyces cerevisiae Swi4/Mbp1 family.

B Mai1, L Breeden.   

Abstract

We have identified Xbp1 (XhoI site-binding protein 1) as a new DNA-binding protein with homology to the DNA-binding domain of the Saccharomyces cerevisiae cell cycle regulating transcription factors Swi4 and Mbp1. The DNA recognition sequence was determined by random oligonucleotide selection and confirmed by gel retardation and footprint analyses. The consensus binding site of Xbp1, GcCTCGA(G/A)G(C/A)g(a/g), is a palindromic sequence, with an XhoI restriction enzyme recognition site at its center. This Xbpl binding site is similar to Swi4/Swi6 and Mbp1/Swi6 binding sites but shows a clear difference from these elements in one of the central core bases. There are binding sites for Xbp1 in the G1 cyclin promoter (CLN1), but they are distinct from the Swi4/Swi6 binding sites in CLN1, and Xbp1 will not bind to Swi4/Swi6 or Mbp1/Swi6 binding sites. The XBP1 promoter contains several stress-regulated elements, and its expression is induced by heat shock, high osmolarity, oxidative stress, DNA damage, and glucose starvation. When fused to the LexA DNA-binding domain, Xbp1 acts as transcriptional repressor, defining it as the first repressor in the Swi4/Mbp1 family and the first potential negative regulator of transcription induced by stress. Overexpression of XBP1 results in a slow-growth phenotype, lengthening of G1, an increase in cell volume, and a repression of G1 cyclin expression. These observations suggest that Xbp1 may contribute to the repression of specific transcripts and cause a transient cell cycle delay under stress conditions.

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Year:  1997        PMID: 9343412      PMCID: PMC232502          DOI: 10.1128/MCB.17.11.6491

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  62 in total

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Authors:  B J Andrews; I Herskowitz
Journal:  Cell       Date:  1989-04-07       Impact factor: 41.582

2.  Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoters.

Authors:  D Kadosh; K Struhl
Journal:  Cell       Date:  1997-05-02       Impact factor: 41.582

3.  Cell cycle control of the yeast HO gene: cis- and trans-acting regulators.

Authors:  L Breeden; K Nasmyth
Journal:  Cell       Date:  1987-02-13       Impact factor: 41.582

4.  Quantitative analysis of the heat shock response of Saccharomyces cerevisiae.

Authors:  M J Miller; N H Xuong; E P Geiduschek
Journal:  J Bacteriol       Date:  1982-07       Impact factor: 3.490

5.  A bacterial repressor protein or a yeast transcriptional terminator can block upstream activation of a yeast gene.

Authors:  R Brent; M Ptashne
Journal:  Nature       Date:  1984 Dec 13-19       Impact factor: 49.962

6.  Isolation of the gene encoding the S. cerevisiae heat shock transcription factor.

Authors:  G Wiederrecht; D Seto; C S Parker
Journal:  Cell       Date:  1988-09-09       Impact factor: 41.582

7.  A central role for SWI6 in modulating cell cycle Start-specific transcription in yeast.

Authors:  L Dirick; T Moll; H Auer; K Nasmyth
Journal:  Nature       Date:  1992-06-11       Impact factor: 49.962

8.  Transcriptional activation by the SV40 AP-1 recognition element in yeast is mediated by a factor similar to AP-1 that is distinct from GCN4.

Authors:  K D Harshman; W S Moye-Rowley; C S Parker
Journal:  Cell       Date:  1988-04-22       Impact factor: 41.582

9.  Heme regulates transcription of the CYC1 gene of S. cerevisiae via an upstream activation site.

Authors:  L Guarente; T Mason
Journal:  Cell       Date:  1983-04       Impact factor: 41.582

10.  The WHI1+ gene of Saccharomyces cerevisiae tethers cell division to cell size and is a cyclin homolog.

Authors:  R Nash; G Tokiwa; S Anand; K Erickson; A B Futcher
Journal:  EMBO J       Date:  1988-12-20       Impact factor: 11.598

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  56 in total

1.  Characterization of the ECB binding complex responsible for the M/G(1)-specific transcription of CLN3 and SWI4.

Authors:  Bernard Mai; Shawna Miles; Linda L Breeden
Journal:  Mol Cell Biol       Date:  2002-01       Impact factor: 4.272

2.  The yeast pafl-rNA polymerase II complex is required for full expression of a subset of cell cycle-regulated genes.

Authors:  Stephanie E Porter; Taylor M Washburn; Meiping Chang; Judith A Jaehning
Journal:  Eukaryot Cell       Date:  2002-10

3.  Analysis of a nonribosomal peptide synthetase gene from Alternaria brassicae and flanking genomic sequences.

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Journal:  Curr Genet       Date:  2004-01-15       Impact factor: 3.886

4.  Extensive low-affinity transcriptional interactions in the yeast genome.

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Journal:  Genome Res       Date:  2006-06-29       Impact factor: 9.043

5.  Regulation of cell size by glucose is exerted via repression of the CLN1 promoter.

Authors:  K Flick; D Chapman-Shimshoni; D Stuart; M Guaderrama; C Wittenberg
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

6.  Identification of the molecular mechanisms underlying the cytotoxic action of a potent platinum metallointercalator.

Authors:  Shaoyu Wang; Vincent J Higgins; Janice R Aldrich-Wright; Ming J Wu
Journal:  J Chem Biol       Date:  2011-12-06

Review 7.  Life in the midst of scarcity: adaptations to nutrient availability in Saccharomyces cerevisiae.

Authors:  Bart Smets; Ruben Ghillebert; Pepijn De Snijder; Matteo Binda; Erwin Swinnen; Claudio De Virgilio; Joris Winderickx
Journal:  Curr Genet       Date:  2010-02       Impact factor: 3.886

8.  The effect of prior assumptions over the weights in BayesPI with application to study protein-DNA interactions from ChIP-based high-throughput data.

Authors:  Junbai Wang
Journal:  BMC Bioinformatics       Date:  2010-08-04       Impact factor: 3.169

Review 9.  Regulation of Cdc28 cyclin-dependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae.

Authors:  M D Mendenhall; A E Hodge
Journal:  Microbiol Mol Biol Rev       Date:  1998-12       Impact factor: 11.056

10.  Uncovering transcriptional interactions via an adaptive fuzzy logic approach.

Authors:  Cheng-Long Chuang; Kenneth Hung; Chung-Ming Chen; Grace S Shieh
Journal:  BMC Bioinformatics       Date:  2009-12-06       Impact factor: 3.169

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