Literature DB >> 9326336

Multilocus genotypes, a tree of individuals, and human evolutionary history.

J L Mountain1, L L Cavalli-Sforza.   

Abstract

Our goal is to infer, from human genetic data, general patterns as well as details of human evolutionary history. Here we present the results of an analysis of genetic data at the level of the individual. A tree relating 144 individuals from 12 human groups of Africa, Asia, Europe, and Oceania, inferred from an average of 75 DNA polymorphisms/individual, is remarkable in that most individuals cluster with other members of their regional group. In order to interpret this tree, we consider the factors that influence the tree pattern, including the number of genetic loci examined, the length of population isolation, the sampling process, and the extent of gene flow among groups. Understanding the impact of these factors enables us to infer details of human evolutionary history that might otherwise remain undetected. Our analyses indicate that some recent ancestor(s) of each of a few of the individuals tested may have immigrated. In general, the populations within regional groups appear to have been isolated from one another for <25,000 years. Regional groups may have been isolated for somewhat longer.

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Year:  1997        PMID: 9326336      PMCID: PMC1715971          DOI: 10.1086/515510

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  35 in total

1.  Ethnic-affiliation estimation by use of population-specific DNA markers.

Authors:  M D Shriver; M W Smith; L Jin; A Marcini; J M Akey; R Deka; R E Ferrell
Journal:  Am J Hum Genet       Date:  1997-04       Impact factor: 11.025

2.  Evolutionary relationships of human populations from an analysis of nuclear DNA polymorphisms.

Authors:  J S Wainscoat; A V Hill; A L Boyce; J Flint; M Hernandez; S L Thein; J M Old; J R Lynch; A G Falusi; D J Weatherall
Journal:  Nature       Date:  1986 Feb 6-12       Impact factor: 49.962

3.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

4.  The rate with which spontaneous mutation alters the electrophoretic mobility of polypeptides.

Authors:  J V Neel; C Satoh; K Goriki; M Fujita; N Takahashi; J Asakawa; R Hazama
Journal:  Proc Natl Acad Sci U S A       Date:  1986-01       Impact factor: 11.205

5.  Use of cyclosporin A in establishing Epstein-Barr virus-transformed human lymphoblastoid cell lines.

Authors:  M A Anderson; J F Gusella
Journal:  In Vitro       Date:  1984-11

6.  Techniques for estimating genetic admixture and applications to the problem of the origin of the Icelanders and the Ashkenazi Jews.

Authors:  E M Wijsman
Journal:  Hum Genet       Date:  1984       Impact factor: 4.132

7.  Phylogenetic analysis. Models and estimation procedures.

Authors:  L L Cavalli-Sforza; A W Edwards
Journal:  Am J Hum Genet       Date:  1967-05       Impact factor: 11.025

8.  Mitochondrial DNA and human evolution.

Authors:  R L Cann; M Stoneking; A C Wilson
Journal:  Nature       Date:  1987 Jan 1-7       Impact factor: 49.962

9.  Human mitochondrial DNA variation and evolution: analysis of nucleotide sequences from seven individuals.

Authors:  C F Aquadro; B D Greenberg
Journal:  Genetics       Date:  1983-02       Impact factor: 4.562

10.  Radiation of human mitochondria DNA types analyzed by restriction endonuclease cleavage patterns.

Authors:  M J Johnson; D C Wallace; S D Ferris; M C Rattazzi; L L Cavalli-Sforza
Journal:  J Mol Evol       Date:  1983       Impact factor: 2.395

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  58 in total

1.  Peopling of Sahul: mtDNA variation in aboriginal Australian and Papua New Guinean populations.

Authors:  A J Redd; M Stoneking
Journal:  Am J Hum Genet       Date:  1999-09       Impact factor: 11.025

2.  Distinctive genetic signatures in the Libyan Jews.

Authors:  N A Rosenberg; E Woolf; J K Pritchard; T Schaap; D Gefel; I Shpirer; U Lavi; B Bonne-Tamir; J Hillel; M W Feldman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-30       Impact factor: 11.205

3.  An extensive analysis of Y-chromosomal microsatellite haplotypes in globally dispersed human populations.

Authors:  M Kayser; M Krawczak; L Excoffier; P Dieltjes; D Corach; V Pascali; C Gehrig; L F Bernini; J Jespersen; E Bakker; L Roewer; P de Knijff
Journal:  Am J Hum Genet       Date:  2001-03-16       Impact factor: 11.025

4.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

5.  Linkage disequilibrium at the ADH2 and ADH3 loci and risk of alcoholism.

Authors:  M Osier; A J Pakstis; J R Kidd; J F Lee; S J Yin; H C Ko; H J Edenberg; R B Lu; K K Kidd
Journal:  Am J Hum Genet       Date:  1999-04       Impact factor: 11.025

6.  Evidence for effective suppression of recombination in the chromosome 17q21 segment spanning RNU2-BRCA1.

Authors:  X Liu; D F Barker
Journal:  Am J Hum Genet       Date:  1999-05       Impact factor: 11.025

7.  Empirical evaluation of genetic clustering methods using multilocus genotypes from 20 chicken breeds.

Authors:  N A Rosenberg; T Burke; K Elo; M W Feldman; P J Freidlin; M A Groenen; J Hillel; A Mäki-Tanila; M Tixier-Boichard; A Vignal; K Wimmers; S Weigend
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

8.  Human population genetic structure and inference of group membership.

Authors:  Michael J Bamshad; Stephen Wooding; W Scott Watkins; Christopher T Ostler; Mark A Batzer; Lynn B Jorde
Journal:  Am J Hum Genet       Date:  2003-01-28       Impact factor: 11.025

Review 9.  A population-genetic perspective on the similarities and differences among worldwide human populations.

Authors:  Noah A Rosenberg
Journal:  Hum Biol       Date:  2011-12       Impact factor: 0.553

10.  DNA dinucleotide evolution in humans: fitting theory to facts.

Authors:  A Renwick; L Davison; H Spratt; J P King; M Kimmel
Journal:  Genetics       Date:  2001-10       Impact factor: 4.562

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