Literature DB >> 932007

Structure of Peptococcus aerogenes ferredoxin. Refinement at 2 A resolution.

E T Adman, L C Siefker, L H Jensen.   

Abstract

The model for ferredoxin from Peptococcus aerogenes, derived from a 2.8-A resolution map, has been refined with a 2-A resolution data set. The conventional index, R, decreased from 0.449 for the initial model to 0.188 for the unconstrained one and 0.206 for the constrained one. The standard deviations of the iron and sulfur atoms are 0.04 to 0.05 A and for the oxygen, nitrogen, and carbon atoms they range from 0.14 to 0.26 A. One hundred forty-six water oxygen atoms were included in the solvent part of the model and were checked by a highly selective criterion, suggesting that most of them represented water molecules.

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Year:  1976        PMID: 932007     DOI: 10.2210/pdb1fdx/pdb

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  18 in total

1.  A kinetic assessment of the sequence of electron transfer from F(X) to F(A) and further to F(B) in photosystem I: the value of the equilibrium constant between F(X) and F(A).

Authors:  V P Shinkarev; I R Vassiliev; J H Golbeck
Journal:  Biophys J       Date:  2000-01       Impact factor: 4.033

2.  Electrogenic light reactions in photosystem I: resolution of electron-transfer rates between the iron-sulfur centers.

Authors:  K Sigfridsson; O Hansson; P Brzezinski
Journal:  Proc Natl Acad Sci U S A       Date:  1995-04-11       Impact factor: 11.205

Review 3.  Heliobacterial photosynthesis.

Authors:  Mark Heinnickel; John H Golbeck
Journal:  Photosynth Res       Date:  2007-04-25       Impact factor: 3.573

4.  Effect of structural modifications on the assembly of a glycinin subunit.

Authors:  C D Dickinson; M P Scott; E H Hussein; P Argos; N C Nielsen
Journal:  Plant Cell       Date:  1990-05       Impact factor: 11.277

5.  PsaC subunit of photosystem I is oriented with iron-sulfur cluster F(B) as the immediate electron donor to ferredoxin and flavodoxin.

Authors:  I R Vassiliev; Y S Jung; F Yang; J H Golbeck
Journal:  Biophys J       Date:  1998-04       Impact factor: 4.033

6.  [4Fe-4S]-cluster-depleted Azotobacter vinelandii ferredoxin I: a new 3Fe iron-sulfur protein.

Authors:  P J Stephens; T V Morgan; F Devlin; J E Penner-Hahn; K O Hodgson; R A Scott; C D Stout; B K Burgess
Journal:  Proc Natl Acad Sci U S A       Date:  1985-09       Impact factor: 11.205

7.  1H NMR investigation of the secondary structure, tertiary contacts and cluster environment of the four-iron ferredoxin from the hyperthermophilic archaeon Thermococcus litoralis.

Authors:  A Donaire; Z H Zhou; M M Adams; G N La Mar
Journal:  J Biomol NMR       Date:  1996-01       Impact factor: 2.835

8.  New perspectives on bacterial ferredoxin evolution.

Authors:  D G George; L T Hunt; L S Yeh; W C Barker
Journal:  J Mol Evol       Date:  1985       Impact factor: 2.395

9.  Paramagnetic 1H NMR spectroscopy of the reduced, unbound photosystem I subunit PsaC: sequence-specific assignment of contact-shifted resonances and identification of mixed- and equal-valence Fe-Fe pairs in [4Fe-4S] centers FA- and FB-.

Authors:  M L Antonkine; D Bentrop; I Bertini; C Luchinat; G Shen; D A Bryant; D Stehlik; J H Golbeck
Journal:  J Biol Inorg Chem       Date:  2000-06       Impact factor: 3.358

10.  Spectroscopic studies of ferricyanide oxidation of Azotobacter vinelandii ferredoxin I.

Authors:  T V Morgan; P J Stephens; F Devlin; C D Stout; K A Melis; B K Burgess
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

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