Literature DB >> 9315862

Purification, characterization, and stereochemical analysis of a C-C hydrolase: 2-hydroxy-6-keto-nona-2,4-diene-1,9-dioic acid 5,6-hydrolase.

W W Lam1, T D Bugg.   

Abstract

2-Hydroxy-6-keto-nona-2,4-diene-1,9-dioic acid 5,6-hydrolase (MhpC) from Escherichia coli has been purified to near homogeneity from an overexpressing strain of E. coli. The purified enzyme is a 29 kDa dimeric protein requiring no cofactors for catalytic activity. The enzyme has a Km of 2.1 microM and a kcat of 36 s-1 for its natural substrate and shows high selectivity for the propionate side chain of the substrate. The stereochemical course of the MhpC reaction was elucidated by conversion of protiosubstrate in 2H2O and conversion of deuteriated substrate in 1H2O, revealing that the reaction proceeds with overall replacement of a succinyl moiety by a proton from water in the H-5E position, with retention of regiochemistry. Isotope exchange was also observed in the H-5Z position of the product, which was rationalized by enzyme-catalyzed exchange of 2H into C-5 of the substrate from 2H2O. These data are consistent with a reversible keto-enol tautomerization taking place as the first step of the enzyme mechanism.

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Year:  1997        PMID: 9315862     DOI: 10.1021/bi971115r

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

1.  AidH, an alpha/beta-hydrolase fold family member from an Ochrobactrum sp. strain, is a novel N-acylhomoserine lactonase.

Authors:  Gui-Ying Mei; Xiao-Xue Yan; Ali Turak; Zhao-Qing Luo; Li-Qun Zhang
Journal:  Appl Environ Microbiol       Date:  2010-06-04       Impact factor: 4.792

2.  Characterization of the hca cluster encoding the dioxygenolytic pathway for initial catabolism of 3-phenylpropionic acid in Escherichia coli K-12.

Authors:  E Díaz; A Ferrández; J L García
Journal:  J Bacteriol       Date:  1998-06       Impact factor: 3.490

Review 3.  Biodegradation of aromatic compounds by Escherichia coli.

Authors:  E Díaz; A Ferrández; M A Prieto; J L García
Journal:  Microbiol Mol Biol Rev       Date:  2001-12       Impact factor: 11.056

4.  Kinetic and structural insight into the mechanism of BphD, a C-C bond hydrolase from the biphenyl degradation pathway.

Authors:  Geoff P Horsman; Jiyuan Ke; Shaodong Dai; Stephen Y K Seah; Jeffrey T Bolin; Lindsay D Eltis
Journal:  Biochemistry       Date:  2006-09-19       Impact factor: 3.162

5.  Identification of a serine hydrolase which cleaves the alicyclic ring of tetralin.

Authors:  M J Hernáez; E Andújar; J L Ríos; S R Kaschabek; W Reineke; E Santero
Journal:  J Bacteriol       Date:  2000-10       Impact factor: 3.490

6.  The bacterial meta-cleavage hydrolase LigY belongs to the amidohydrolase superfamily, not to the α/β-hydrolase superfamily.

Authors:  Eugene Kuatsjah; Anson C K Chan; Marek J Kobylarz; Michael E P Murphy; Lindsay D Eltis
Journal:  J Biol Chem       Date:  2017-09-20       Impact factor: 5.157

7.  Degradation of polychlorinated biphenyl metabolites by naphthalene-catabolizing enzymes.

Authors:  D Barriault; J Durand; H Maaroufi; L D Eltis; M Sylvestre
Journal:  Appl Environ Microbiol       Date:  1998-12       Impact factor: 4.792

8.  The lid domain of the MCP hydrolase DxnB2 contributes to the reactivity toward recalcitrant PCB metabolites.

Authors:  Antonio C Ruzzini; Shiva Bhowmik; Katherine C Yam; Subhangi Ghosh; Jeffrey T Bolin; Lindsay D Eltis
Journal:  Biochemistry       Date:  2013-08-09       Impact factor: 3.162

9.  A substrate-assisted mechanism of nucleophile activation in a Ser-His-Asp containing C-C bond hydrolase.

Authors:  Antonio C Ruzzini; Shiva Bhowmik; Subhangi Ghosh; Katherine C Yam; Jeffrey T Bolin; Lindsay D Eltis
Journal:  Biochemistry       Date:  2013-10-09       Impact factor: 3.162

10.  Characterization of a C-C bond hydrolase from Sphingomonas wittichii RW1 with novel specificities towards polychlorinated biphenyl metabolites.

Authors:  Stephen Y K Seah; Jiyuan Ke; Geoffroy Denis; Geoff P Horsman; Pascal D Fortin; Cheryl J Whiting; Lindsay D Eltis
Journal:  J Bacteriol       Date:  2007-04-06       Impact factor: 3.490

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