Literature DB >> 9287316

Equilibrium and kinetic study of the conformational transition toward the active state of p21Ha-ras, induced by the binding of BeF3- to the GDP-bound state, in the absence of GTPase-activating proteins.

J F Díaz1, A Sillen, Y Engelborghs.   

Abstract

Hitherto ras-related GTP-binding proteins have been considered not to bind phosphate analogs (Kahn, R. A. (1991) J. Biol. Chem. 266, 15595-15597), at least in the absence of activating proteins (Mittal, R., Reza, M., Goody, R., and Wittinghofer, A. (1996) Science 273, 115-117). In this work, we have used a fluorescent active mutant (Y32W) of p21(Ha-)ras to demonstrate that BeF3- binds to the GDP. p21(Ha-ras) complex in the absence of activating proteins. It induces a conformational change leading to a state with fluorescence properties similar to those of the active state. The binding has a low affinity (Kd at 25 degrees C = 8.1 +/- 0.3 mM) and is endothermic (DeltaH = 22.3 +/- 1.6 kJ mol-1). The similarity between the GTP-bound form and the GDP.BeF3--bound form has been confirmed using lifetime analysis of the tryptophan fluorescence. The kinetic analysis of the process indicates that the binding can be divided into a first bimolecular step, which accounts for the association of the anion with its binding site, and a second step, which corresponds to an internal conformational transition of the GDP. BeF3-.p21(Ha-)ras complex to its final state. Both steps are endothermic (DeltaH1 = 15 +/- 2 kJ mol-1 and DeltaH2 = 8 +/- 2 kJ mol-1). The kinetically determined enthalpy change of 23 +/- 4 kJ mol-1 is in excellent agreement with the equilibrium analysis.

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Year:  1997        PMID: 9287316     DOI: 10.1074/jbc.272.37.23138

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  12 in total

1.  Characterization of the hinges of the effector loop in the reaction pathway of the activation of ras-proteins. Kinetics of binding of beryllium trifluoride to V29G and I36G mutants of Ha-ras-p21.

Authors:  S Kuppens; J F Díaz; Y Engelborghs
Journal:  Protein Sci       Date:  1999-09       Impact factor: 6.725

2.  A step toward the prediction of the fluorescence lifetimes of tryptophan residues in proteins based on structural and spectral data.

Authors:  A Sillen; J F Díaz; Y Engelborghs
Journal:  Protein Sci       Date:  2000-01       Impact factor: 6.725

3.  Reversible movement of switch 1 loop of myosin determines actin interaction.

Authors:  Bálint Kintses; Máté Gyimesi; David S Pearson; Michael A Geeves; Wei Zeng; Clive R Bagshaw; András Málnási-Csizmadia
Journal:  EMBO J       Date:  2007-01-10       Impact factor: 11.598

4.  Membrane extraction of Rab proteins by GDP dissociation inhibitor characterized using attenuated total reflection infrared spectroscopy.

Authors:  Konstantin Gavriljuk; Aymelt Itzen; Roger S Goody; Klaus Gerwert; Carsten Kötting
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-29       Impact factor: 11.205

5.  Beryllium, an adjuvant that promotes gamma interferon production.

Authors:  J Y Lee; O Atochina; B King; L Taylor; M Elloso; P Scott; M D Rossman
Journal:  Infect Immun       Date:  2000-07       Impact factor: 3.441

6.  Catalytic mechanism of a mammalian Rab·RabGAP complex in atomic detail.

Authors:  Konstantin Gavriljuk; Emerich-Mihai Gazdag; Aymelt Itzen; Carsten Kötting; Roger S Goody; Klaus Gerwert
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-12       Impact factor: 11.205

7.  Role of the switch II region in the conformational transition of activation of Ha-ras-p21.

Authors:  J F Díaz; M M Escalona; S Kuppens; Y Engelborghs
Journal:  Protein Sci       Date:  2000-02       Impact factor: 6.725

8.  Conformational states of the switch I region of Ha-ras-p21 in hinge residue mutants studied by fluorescence lifetime and fluorescence anisotropy measurements.

Authors:  Steven Kuppens; Mario Hellings; Jan Jordens; Stefan Verheyden; Yves Engelborghs
Journal:  Protein Sci       Date:  2003-05       Impact factor: 6.725

Review 9.  Invited review: Small GTPases and their GAPs.

Authors:  Ashwini K Mishra; David G Lambright
Journal:  Biopolymers       Date:  2016-08       Impact factor: 2.505

10.  Structural model for differential cap maturation at growing microtubule ends.

Authors:  Juan Estévez-Gallego; Fernando Josa-Prado; Siou Ku; Ruben M Buey; Francisco A Balaguer; Andrea E Prota; Daniel Lucena-Agell; Christina Kamma-Lorger; Toshiki Yagi; Hiroyuki Iwamoto; Laurence Duchesne; Isabel Barasoain; Michel O Steinmetz; Denis Chrétien; Shinji Kamimura; J Fernando Díaz; Maria A Oliva
Journal:  Elife       Date:  2020-03-10       Impact factor: 8.140

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