Literature DB >> 9285799

The human COX10 gene is disrupted during homologous recombination between the 24 kb proximal and distal CMT1A-REPs.

L T Reiter1, T Murakami, T Koeuth, R A Gibbs, J R Lupski.   

Abstract

The CMT1A-REPs are two large directly repeating DNA sequences located on chromosome 17p11.2-p12 flanking the region duplicated in patients with Charcot-Marie-Tooth disease type 1A (CMT1A) and deleted in patients with hereditary neuropathy with liability to pressure palsies (HNPP). We have sequenced two cosmids, c74F4 and c15H12, which contain the entire proximal and distal CMT1A-REPs and determined that these repeats are approximately 99% identical across a 24,011 bp region. In addition, both contain an exon of the human heme A:farnesyltransferase gene (COX10). Hybridization studies revealed that COX10 spans the distal CMT1A-REP, while the proximal CMT1A-REP contains an isolated COX10 'pseudo-exon'. There is also a COX10 hybridization signal on chromosome 10 which appears to represent a processed pseudogene. We propose that the distal CMT1A-REP represents the progenitor copy of COX10 exon VI which was duplicated with surrounding intronic sequences during mammalian genome evolution and that the HNPP deletion results in a COX10 null allele.

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Year:  1997        PMID: 9285799     DOI: 10.1093/hmg/6.9.1595

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  28 in total

1.  Localization of mariner DNA transposons in the human genome by PRINS.

Authors:  L T Reiter; T Liehr; B Rautenstrauss; H M Robertson; J R Lupski
Journal:  Genome Res       Date:  1999-09       Impact factor: 9.043

2.  The mosaic structure of human pericentromeric DNA: a strategy for characterizing complex regions of the human genome.

Authors:  J E Horvath; S Schwartz; E E Eichler
Journal:  Genome Res       Date:  2000-06       Impact factor: 9.043

3.  2002 Curt Stern Award Address. Genomic disorders recombination-based disease resulting from genomic architecture.

Authors:  James R Lupski
Journal:  Am J Hum Genet       Date:  2003-02       Impact factor: 11.025

4.  Genome architecture catalyzes nonrecurrent chromosomal rearrangements.

Authors:  Paweł Stankiewicz; Christine J Shaw; Jason D Dapper; Keiko Wakui; Lisa G Shaffer; Marjorie Withers; Leah Elizondo; Sung-Sup Park; James R Lupski
Journal:  Am J Hum Genet       Date:  2003-03-20       Impact factor: 11.025

5.  Inheritance of Charcot-Marie-Tooth disease 1A with rare nonrecurrent genomic rearrangement.

Authors:  Byung-Ok Choi; Nam Keun Kim; Sun Wha Park; Young Se Hyun; Hyeon Jeong Jeon; Jung Hee Hwang; Ki Wha Chung
Journal:  Neurogenetics       Date:  2010-12-31       Impact factor: 2.660

6.  Serial segmental duplications during primate evolution result in complex human genome architecture.

Authors:  Pawełl Stankiewicz; Christine J Shaw; Marjorie Withers; Ken Inoue; James R Lupski
Journal:  Genome Res       Date:  2004-11       Impact factor: 9.043

7.  Evidence for involvement of TRE-2 (USP6) oncogene, low-copy repeat and acrocentric heterochromatin in two families with chromosomal translocations.

Authors:  Zhishuo Ou; Małgorzata Jarmuz; Steven P Sparagana; Jacques Michaud; Jean-Claude Décarie; Svetlana A Yatsenko; Beata Nowakowska; Patti Furman; Chad A Shaw; Lisa G Shaffer; James R Lupski; A Craig Chinault; Sau W Cheung; Paweł Stankiewicz
Journal:  Hum Genet       Date:  2006-06-22       Impact factor: 4.132

8.  The evolutionary chromosome translocation 4;19 in Gorilla gorilla is associated with microduplication of the chromosome fragment syntenic to sequences surrounding the human proximal CMT1A-REP.

Authors:  P Stankiewicz; S S Park; K Inoue; J R Lupski
Journal:  Genome Res       Date:  2001-07       Impact factor: 9.043

9.  An 85-kb tandem triplication in the slow Wallerian degeneration (Wlds) mouse.

Authors:  M P Coleman; L Conforti; E A Buckmaster; A Tarlton; R M Ewing; M C Brown; M F Lyon; V H Perry
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

10.  DNA rearrangements on both homologues of chromosome 17 in a mildly delayed individual with a family history of autosomal dominant carpal tunnel syndrome.

Authors:  L Potocki; K S Chen; T Koeuth; J Killian; S T Iannaccone; S K Shapira; C D Kashork; A S Spikes; L G Shaffer; J R Lupski
Journal:  Am J Hum Genet       Date:  1999-02       Impact factor: 11.025

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