Literature DB >> 9271380

Functional analysis of Rrp7p, an essential yeast protein involved in pre-rRNA processing and ribosome assembly.

A Baudin-Baillieu1, D Tollervey, C Cullin, F Lacroute.   

Abstract

During the functional analysis of open reading frames (ORFs) identified during the sequencing of chromosome III of Saccharomyces cerevisiae, the previously uncharacterized ORF YCL031C (now designated RRP7) was deleted. RRP7 is essential for cell viability, and a conditional null allele was therefore constructed, by placing its expression under the control of a regulated GAL promoter. Genetic depletion of Rrp7p inhibited the pre-rRNA processing steps that lead to the production of the 20S pre-rRNA, resulting in reduced synthesis of the 18S rRNA and a reduced ratio of 40S to 60S ribosomal subunits. A screen for multicopy suppressors of the lethality of the GAL::rrp7 allele isolated the two genes encoding a previously unidentified ribosomal protein (r-protein) that is highly homologous to the rat r-protein S27. When present in multiple copies, either gene can suppress the lethality of an RRP7 deletion mutation and can partially restore the ribosomal subunit ratio in Rrp7p-depleted cells. Deletion of both r-protein genes is lethal; deletion of either single gene has an effect on pre-rRNA processing similar to that of Rrp7p depletion. We believe that Rrp7p is required for correct assembly of rpS27 into the preribosomal particle, with the inhibition of pre-rRNA processing appearing as a consequence of this defect.

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Year:  1997        PMID: 9271380      PMCID: PMC232353          DOI: 10.1128/MCB.17.9.5023

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  37 in total

1.  Improved method for high efficiency transformation of intact yeast cells.

Authors:  D Gietz; A St Jean; R A Woods; R H Schiestl
Journal:  Nucleic Acids Res       Date:  1992-03-25       Impact factor: 16.971

2.  Yeast NSR1 protein that has structural similarity to mammalian nucleolin is involved in pre-rRNA processing.

Authors:  K Kondo; M Inouye
Journal:  J Biol Chem       Date:  1992-08-15       Impact factor: 5.157

3.  Processing of the yeast pre-rRNA at sites A(2) and A(3) is linked.

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Journal:  RNA       Date:  1996-01       Impact factor: 4.942

4.  The tails of ubiquitin precursors are ribosomal proteins whose fusion to ubiquitin facilitates ribosome biogenesis.

Authors:  D Finley; B Bartel; A Varshavsky
Journal:  Nature       Date:  1989-03-30       Impact factor: 49.962

5.  Depletion of U14 small nuclear RNA (snR128) disrupts production of 18S rRNA in Saccharomyces cerevisiae.

Authors:  H D Li; J Zagorski; M J Fournier
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

6.  Alternate pathways for processing in the internal transcribed spacer 1 in pre-rRNA of Saccharomyces cerevisiae.

Authors:  L Lindahl; R H Archer; J M Zengel
Journal:  Nucleic Acids Res       Date:  1994-12-11       Impact factor: 16.971

Review 7.  Processing of pre-ribosomal RNA in Saccharomyces cerevisiae.

Authors:  J Venema; D Tollervey
Journal:  Yeast       Date:  1995-12       Impact factor: 3.239

8.  Zinc finger-like motifs in rat ribosomal proteins S27 and S29.

Authors:  Y L Chan; K Suzuki; J Olvera; I G Wool
Journal:  Nucleic Acids Res       Date:  1993-02-11       Impact factor: 16.971

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Authors:  S Stettler; N Chiannilkulchai; S Hermann-Le Denmat; D Lalo; F Lacroute; A Sentenac; P Thuriaux
Journal:  Mol Gen Genet       Date:  1993-05

10.  New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae.

Authors:  A Wach; A Brachat; R Pöhlmann; P Philippsen
Journal:  Yeast       Date:  1994-12       Impact factor: 3.239

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  39 in total

Review 1.  Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiae.

Authors:  D Kressler; P Linder; J de La Cruz
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

2.  Genes encoding ribosomal proteins Rps0A/B of Saccharomyces cerevisiae interact with TOM1 mutants defective in ribosome synthesis.

Authors:  A L Tabb; T Utsugi; C R Wooten-Kee; T Sasaki; S A Edling; W Gump; Y Kikuchi; S R Ellis
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

3.  Yeast Krr1p physically and functionally interacts with a novel essential Kri1p, and both proteins are required for 40S ribosome biogenesis in the nucleolus.

Authors:  T Sasaki; A Toh-E; Y Kikuchi
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

4.  The NMR solution structure of the 30S ribosomal protein S27e encoded in gene RS27_ARCFU of Archaeoglobus fulgidis reveals a novel protein fold.

Authors:  Catherine Herve du Penhoat; Hanudatta S Atreya; Yang Shen; Gaohua Liu; Thomas B Acton; Rong Xiao; Zhaohui Li; Diana Murray; Gaetano T Montelione; Thomas Szyperski
Journal:  Protein Sci       Date:  2004-05       Impact factor: 6.725

5.  Genetic and biochemical interactions among Yar1, Ltv1 and Rps3 define novel links between environmental stress and ribosome biogenesis in Saccharomyces cerevisiae.

Authors:  Jesse W Loar; Robert M Seiser; Alexandra E Sundberg; Holly J Sagerson; Nasreen Ilias; Pamela Zobel-Thropp; Elizabeth A Craig; Deborah E Lycan
Journal:  Genetics       Date:  2004-12       Impact factor: 4.562

6.  Genetic evidence for 18S rRNA binding and an Rps19p assembly function of yeast nucleolar protein Nep1p.

Authors:  Markus Buchhaupt; Britta Meyer; Peter Kötter; Karl-Dieter Entian
Journal:  Mol Genet Genomics       Date:  2006-05-24       Impact factor: 3.291

7.  The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.

Authors:  Jorge Pérez-Fernández; Angel Román; Javier De Las Rivas; Xosé R Bustelo; Mercedes Dosil
Journal:  Mol Cell Biol       Date:  2007-05-21       Impact factor: 4.272

8.  Potential interface between ribosomal protein production and pre-rRNA processing.

Authors:  Dipayan Rudra; Jaideep Mallick; Yu Zhao; Jonathan R Warner
Journal:  Mol Cell Biol       Date:  2007-04-23       Impact factor: 4.272

9.  Functional specificity among ribosomal proteins regulates gene expression.

Authors:  Suzanne Komili; Natalie G Farny; Frederick P Roth; Pamela A Silver
Journal:  Cell       Date:  2007-11-02       Impact factor: 41.582

10.  Purification and characterization of the nuclear RNase P holoenzyme complex reveals extensive subunit overlap with RNase MRP.

Authors:  J R Chamberlain; Y Lee; W S Lane; D R Engelke
Journal:  Genes Dev       Date:  1998-06-01       Impact factor: 11.361

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