Literature DB >> 9271025

B-cell target DNA quantity is a critical factor in the interpretation of B-cell clonality by PCR.

J M Taylor1, D V Spagnolo, P H Kay.   

Abstract

Criteria for the assessment of clonality by Southern blotting are well established but this is not the case for polymerase chain reaction (PCR)-based assays. Our studies, and infrequent reports in the literature, indicate that B-cell clonality may be erroneously inferred if only small numbers of polyclonal B-cells are present in test samples. In order to establish criteria to minimise the false positive assignment of B-cell clonality, DNA was analysed in a semi-nested PCR to detect rearrangement of the immunoglobulin heavy chain gene using a range (1 microgram-0.1 ng) of target DNA amounts from four tonsils and five lymph nodes showing reactive follicular hyperplasia, and from six B-cell lymphomas. A discrete, narrow band of PCR product of constant size was detected throughout the range of target DNA amounts in most lymphomas indicating the presence of a monoclonal B-cell population. In contrast, from the non-malignant tonsils and lymph nodes, larger target amounts generated a broad band of PCR products indicating populations of polyclonal B-cells, but smaller target amounts generated discrete, narrow PCR product bands of inconstant size indicating oligo- or monoclonal B-cell populations. Results of this study demonstrate that a range of DNA target amounts should be tested when the proportion of B-cells in a sample is unknown, thus preventing the analysis of insufficient target DNA which may lead to the false assignment of clonality.

Entities:  

Mesh:

Substances:

Year:  1997        PMID: 9271025     DOI: 10.1080/00313029700169165

Source DB:  PubMed          Journal:  Pathology        ISSN: 0031-3025            Impact factor:   5.306


  9 in total

1.  PCR analysis of the immunoglobulin heavy chain gene in polyclonal processes can yield pseudoclonal bands as an artifact of low B cell number.

Authors:  K S Elenitoba-Johnson; S D Bohling; R S Mitchell; M S Brown; R S Robetorye
Journal:  J Mol Diagn       Date:  2000-05       Impact factor: 5.568

2.  PCR methods for determining B cell clonality.

Authors:  D E Sabath; B L Wood; S J Kussick
Journal:  J Mol Diagn       Date:  2000-11       Impact factor: 5.568

3.  Molecular barcodes detect redundancy and contamination in hairpin-bisulfite PCR.

Authors:  Brooks E Miner; Reinhard J Stöger; Alice F Burden; Charles D Laird; R Scott Hansen
Journal:  Nucleic Acids Res       Date:  2004-09-30       Impact factor: 16.971

4.  Application of BIOMED-2 primers in fixed and decalcified bone marrow biopsies: analysis of immunoglobulin H receptor rearrangements in B-cell non-Hodgkin's lymphomas.

Authors:  Silke Lassmann; Uirike V Gerlach; Katja Technau-Ihling; Martin Werner; Paul Fisch
Journal:  J Mol Diagn       Date:  2005-11       Impact factor: 5.568

5.  Analysis of T-cell clonality using laser capture microdissection and high-resolution microcapillary electrophoresis.

Authors:  Evgeny Yakirevich; Cynthia L Jackson; Patricia A Meitner; Dolores MacKenzie; Rose Tavares; Leslie Robinson-Bostom; Ronald A DeLellis; Murray B Resnick
Journal:  J Mol Diagn       Date:  2007-07-09       Impact factor: 5.568

6.  Immunoglobulin heavy chain gene analysis in lymphomas: a multi-center study demonstrating the heterogeneity of performance of polymerase chain reaction assays.

Authors:  Adam Bagg; Rita M Braziel; Daniel A Arber; Karen E Bijwaard; Albert Y Chu
Journal:  J Mol Diagn       Date:  2002-05       Impact factor: 5.568

7.  Clonal B cell populations in a minority of patients with Hashimoto's thyroiditis.

Authors:  A Saxena; E C Alport; O Moshynska; R Kanthan; M A Boctor
Journal:  J Clin Pathol       Date:  2004-12       Impact factor: 3.411

8.  Increased sensitivity of B-cell clonality analysis in formalin-fixed and paraffin-embedded B-cell lymphoma samples using an enzyme blend with both 5'-->3' DNA polymerase and 3'-->5' exonuclease activity.

Authors:  Timea P Gurbity; Eniko Bagdi; Nicole A Groen; Leo M Budel; Mustaffa Abbou; Laszlo Krenacs; Winand N M Dinjens
Journal:  Virchows Arch       Date:  2003-08-21       Impact factor: 4.064

9.  Primary malignant lymphoma of the brain: mutation pattern of rearranged immunoglobulin heavy chain gene.

Authors:  Sumio Endo; Shu-Jing Zhang; Takafumi Saito; Mitsuo Kouno; Toshihiko Kuroiwa; Kazuo Washiyama; Toshiro Kumanishi
Journal:  Jpn J Cancer Res       Date:  2002-12
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.